WormBase Tree Display for Variation: WBVar00046231
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| WBVar00046231 | Name | Public_name | WBVar00046231 | ||
|---|---|---|---|---|---|
| Other_name | pas20843 | ||||
| snp_C32A3[1] | |||||
| haw142967 | |||||
| cewivar00106096 | |||||
| C32A3.1a.1:c.57-1809G>A | |||||
| HGVSg | CHROMOSOME_III:g.3620340C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C32A3 | |
| Flanking_sequences | ggtttcatgtgtgtgtgtgtgtatttttggaataaaaaaaaggaaaaggggtgtctcgatgcgtttagtgagtgtgtttgtgtgcatgtgggtatgcaagtgtttcctacatatgtgtgtagcttgcccggaatccagcagcacacgtcacgaggaatcaggtgaagttagggttcgcacgttcgagcaaagttatccataaattaacacgaattctttgcaatcggaaagactctaacaaaacttcttggagtaatttaaactctagttagagactgttcggatgttataaaagtcatc | cgttgatcttctcgtcgcacacacacacactgatctaccaatagagtgcaacaagaggacatgcgcggtttggtgggctagatgtgaagcgaccgccctggtgatcacaattcgctaatccttctcaaacaacatgtgttgcattggagaagtgtagataaggtgttgttgttgttattcgggttgtataaagaagcttattttagagaagaaagagaagaagatacggaaagctggctatatgcagcaccaacctctttccaaactgatcgactttctttttcttcttctcctcttttt | |||
| Mapping_target | C32A3 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01445029 | |||
| WBVar00243418 | |||||
| WBVar00562832 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00004765 | |||
| Transcript | C32A3.1a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C32A3.1a.1:c.57-1809G>A | ||||
| Intron_number | 2/7 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00004703 | |||||
| Method | WGS_Pasadena_Quinlan |
