WormBase Tree Display for Variation: WBVar00035938
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| WBVar00035938 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00035938 | |||
| Other_name | pas1308 | ||||
| haw38310 | |||||
| cewivar00019790 | |||||
| CE53391:p.Thr423= | |||||
| Y71D11A.1a.1:c.3972G>T | |||||
| Y71D11A.1b.1:c.1269G>T | |||||
| CE53242:p.Thr1324= | |||||
| HGVSg | CHROMOSOME_III:g.1167168G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y92C3A | |
| Flanking_sequences | tatcgattcgtgcagaaaccgacac | gtccatgtagatcatcagctaaaag | |||
| Mapping_target | Y92C3A | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (36) | |||||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01390802 | |||
| WBVar00096449 | |||||
| WBVar01256388 | |||||
| WBVar01323757 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022103 | |||
| Transcript | Y71D11A.1b.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y71D11A.1b.1:c.1269G>T | ||||
| HGVSp | CE53391:p.Thr423= | ||||
| cDNA_position | 1269 | ||||
| CDS_position | 1269 | ||||
| Protein_position | 423 | ||||
| Exon_number | 7/18 | ||||
| Codon_change | acG/acT | ||||
| Amino_acid_change | T | ||||
| Y71D11A.1a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71D11A.1a.1:c.3972G>T | ||||
| HGVSp | CE53242:p.Thr1324= | ||||
| cDNA_position | 3972 | ||||
| CDS_position | 3972 | ||||
| Protein_position | 1324 | ||||
| Exon_number | 14/26 | ||||
| Codon_change | acG/acT | ||||
| Amino_acid_change | T | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw38310 | ||||
| Method | WGS_Hawaiian_Waterston |
