WormBase Tree Display for Variation: WBVar00035886
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WBVar00035886 | Name | Public_name | WBVar00035886 | ||
---|---|---|---|---|---|
Other_name | pas18774 | ||||
cewivar00078830 | |||||
W09B6.4d.1:c.194+780G>T | |||||
W09B6.4a.2:c.-8+781G>T | |||||
W09B6.1a.1:c.-176-771C>A | |||||
W09B6.1c.1:c.158-771C>A | |||||
HGVSg | CHROMOSOME_II:g.1139571C>A | ||||
Sequence_details | SMap | S_parent | Sequence | W09B6 | |
Flanking_sequences | gaaatcttatagaacatgttggaatttggctgaaaatggcttaaagtatggatgaatgtgataaaatattgattaagactgacaaaattggaaatttgaaaaaataatttttggccaaaaaaaatttttttttggaaaaattcgaaattgttttttttcgattttctctgaaacttgtctgaaaattgaattttagtgtgttttttacaatttcgacttgaaaaaattacataaaacgctcaaaatctattgaactatactgctattataagagtgctattatgaatgtttagattttaa | ttggctgaaaaaaatgactaaaagtatagattaatgtgattaaatattgattagcaatgaaaaagttgaaaatttgaaaataaaaatttttggccaaaaaaaattttttttggaaaattttcaaacaatttttttttcgattttctctgaaattgtcagaaatactgattttagtgtgtgttttctcaattttcactcgaaaaagggtacaaaaaactgcaaaaaagggtacaaaaacagcaaaaaaaaatggctttacacatttattaggaatgaaacagtcgaaagtttggaaaaaag | |||
Mapping_target | W09B6 | ||||
Type_of_mutation | Substitution | C | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00021104 | |||
WBGene00004076 | |||||
Transcript | W09B6.4a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.4a.2:c.-8+781G>T | ||||
Intron_number | 2/9 | ||||
W09B6.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.1c.1:c.158-771C>A | ||||
Intron_number | 2/10 | ||||
W09B6.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.1a.1:c.-176-771C>A | ||||
Intron_number | 2/12 | ||||
W09B6.4d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | W09B6.4d.1:c.194+780G>T | ||||
Intron_number | 2/7 | ||||
Method | WGS_Pasadena_Quinlan |