WormBase Tree Display for Variation: WBVar00033441
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| WBVar00033441 | Name | Public_name | WBVar00033441 | ||
|---|---|---|---|---|---|
| Other_name | pas18285 | ||||
| snp_K04E7[3] | |||||
| cewivar00056718 | |||||
| K04E7.2.1:c.432-104T>C | |||||
| HGVSg | CHROMOSOME_X:g.6458670T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | K04E7 | |
| Flanking_sequences | gctataccacaccacttctcggatcaattgttgcggacggatacattggaaaattctggtatgtaataattgttgttttgcactcaataacgacttttcaggacaatcttctctgtctcaattctatacgcaatcggacaagtcgtgctcgctctcgcttctactaagaattttcaatcttcagttcacccgtaagtgatgcttgttccagtattcgacgcataaacttatcatgcaacttttccgtctttacgaattcctctcgattgaaacaaggcatgatgataagaacttcaaccg | ggcaacttttgcccgacagtgcacgcgccacattaaacattaaaaaactgaaaccgaacaaaattaaaaagggttcacaagaaataaactgctgaattttcagatggatggatctgtctggattactgatcattgcgttcggtaccggaggaatcaagccatgtgtgtctgcattcggaggagatcaattcgagttaggacaagaaagaatgctctcactcttcttttccatgttctacttttccatcaacgcaggatctatgatctctactttcatctctcccatcttcagatgtaaac | |||
| Mapping_target | K04E7 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (163) | |||||
| Laboratory | QX | ||||
| Person | WBPerson6900 | ||||
| WBPerson1730 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01469365 | |||
| WBVar00245431 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003877 | |||
| Transcript | K04E7.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | K04E7.2.1:c.432-104T>C | ||||
| Intron_number | 5/15 | ||||
| Reference | WBPaper00040707 | ||||
| WBPaper00004703 | |||||
| Method | WGS_Pasadena_Quinlan |
