WormBase Tree Display for Variation: WBVar00032583
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WBVar00032583 | Name | Public_name | WBVar00032583 | ||
---|---|---|---|---|---|
Other_name | haw37639 | ||||
haw139617 | |||||
cewivar00192398 | |||||
F23H11.8b.1:c.1286-112T>G | |||||
F23H11.8a.1:c.1691-112T>G | |||||
F23H11.8c.1:c.1496-112T>G | |||||
F23H11.8b.2:c.1286-112T>G | |||||
HGVSg | CHROMOSOME_III:g.920303A>C | ||||
Sequence_details | SMap | S_parent | Sequence | F23H11 | |
Flanking_sequences | ttacaaaagtgtttaaaaaaagaca | caaaagaagcgtaggatataattgg | |||
Mapping_target | F23H11 | ||||
Type_of_mutation | Substitution | A | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | ||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00559482 | |||
WBVar01389825 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003969 | |||
Transcript | F23H11.8b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F23H11.8b.2:c.1286-112T>G | ||||
Intron_number | 4/6 | ||||
F23H11.8c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F23H11.8c.1:c.1496-112T>G | ||||
Intron_number | 5/6 | ||||
F23H11.8b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F23H11.8b.1:c.1286-112T>G | ||||
Intron_number | 5/7 | ||||
F23H11.8a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F23H11.8a.1:c.1691-112T>G | ||||
Intron_number | 6/8 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw37639 | ||||
Method | WGS_Hawaiian_Waterston |