WormBase Tree Display for Variation: WBVar00029163
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WBVar00029163 | Name | Public_name | WBVar00029163 | ||
---|---|---|---|---|---|
Other_name | haw36955 | ||||
haw139102 | |||||
cewivar00146357 | |||||
Y50D7A.6.3:c.-3-2497G>A | |||||
Y50D7A.6.4:c.-3-2497G>A | |||||
Y50D7A.6.2:c.-3-2497G>A | |||||
HGVSg | CHROMOSOME_III:g.218919G>A | ||||
Sequence_details | SMap | S_parent | Sequence | W10C4 | |
Flanking_sequences | ttttttttaggttttcacaagtttt | ggttaaaaaaatctgaaaaatctaa | |||
Mapping_target | W10C4 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01388808 | |||
WBVar00558967 | |||||
Status | Live | ||||
Affects | Gene | WBGene00002230 | |||
Transcript | Y50D7A.6.4 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D7A.6.4:c.-3-2497G>A | ||||
Intron_number | 1/14 | ||||
Y50D7A.6.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D7A.6.3:c.-3-2497G>A | ||||
Intron_number | 1/15 | ||||
Y50D7A.6.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y50D7A.6.2:c.-3-2497G>A | ||||
Intron_number | 1/15 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw36955 | ||||
Method | WGS_Hawaiian_Waterston |