WormBase Tree Display for Gene: WBGene00002230
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| WBGene00002230 | Evidence | Paper_evidence | WBPaper00003466 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_III | ||||||
| Identity | Version | 3 | |||||||
| Name | CGC_name | klp-20 | Paper_evidence | WBPaper00065085 | |||||
| Person_evidence | WBPerson589 | ||||||||
| Sequence_name | Y50D7A.6 | ||||||||
| Molecular_name | Y50D7A.6 | ||||||||
| Y50D7A.6.1 | |||||||||
| CE26143 | |||||||||
| Y50D7A.6.2 | |||||||||
| Y50D7A.6.3 | |||||||||
| Y50D7A.6.4 | |||||||||
| Other_name | krp85 | Accession_evidence | EMBL | AF149288 | |||||
| vab-6 | Paper_evidence | WBPaper00065085 | |||||||
| CELE_Y50D7A.6 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | klp-20 | ||||||||
| DB_info | Database | AceView | gene | 3A851 | |||||
| WormQTL | gene | WBGene00002230 | |||||||
| WormFlux | gene | WBGene00002230 | |||||||
| NDB | locus_tag | CELE_Y50D7A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00002230|UniProtKB=Q965T6 | |||||||
| family | PTHR24115 | ||||||||
| NCBI | gene | 3565057 | |||||||
| RefSeq | protein | NM_064777.7 | |||||||
| SwissProt | UniProtAcc | Q965T6 | |||||||
| TREEFAM | TREEFAM_ID | TF105223 | |||||||
| UniProt_GCRP | UniProtAcc | Q965T6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 04 Aug 2006 11:55:59 | WBPerson2970 | Event | Acquires_merge | WBGene00002236 | ||||
| 3 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | klp-20 | ||||
| Other_name | vab-6 | ||||||||
| Acquires_merge | WBGene00002236 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | klp | ||||||||
| Allele (855) | |||||||||
| Possibly_affected_by | WBVar02153216 | ||||||||
| Strain | WBStrain00002224 | ||||||||
| WBStrain00032857 | |||||||||
| WBStrain00032909 | |||||||||
| WBStrain00037337 | |||||||||
| WBStrain00024326 | |||||||||
| WBStrain00051699 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (24) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Concise_description | klp-20 encodes one of 19 C. elegans kinesin-like proteins; KLP-20, along with KLP-11 and KAP-1, is a component of heterotrimeric kinesin-II that cooperates with OSM-3 motors to facilitate anterograde intraflagellar transport essential for formation of sensory neuron cilia. | Paper_evidence | WBPaper00024501 | |||||
| WBPaper00028530 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 04 Sep 2008 00:00:00 | ||||||||
| Automated_description | Enables microtubule motor activity. Involved in microtubule-based movement. Part of axonemal heterotrimeric kinesin-II complex. Expressed in ciliated neurons; distal tip cell; head; touch receptor neurons; and ventral nerve cord. Human ortholog(s) of this gene implicated in silicosis. Is an ortholog of human KIF3A (kinesin family member 3A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:10325 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6319) | ||||
| Molecular_info | Corresponding_CDS | Y50D7A.6 | |||||||
| Corresponding_transcript | Y50D7A.6.1 | ||||||||
| Y50D7A.6.2 | |||||||||
| Y50D7A.6.3 | |||||||||
| Y50D7A.6.4 | |||||||||
| Other_sequence (44) | |||||||||
| Associated_feature | WBsf644908 | ||||||||
| WBsf991011 | |||||||||
| WBsf991012 | |||||||||
| WBsf991013 | |||||||||
| WBsf1014028 | |||||||||
| WBsf1014029 | |||||||||
| WBsf1014030 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057089 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00079244 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (13) | |||||||||
| Drives_construct | WBCnstr00002293 | ||||||||
| WBCnstr00004391 | |||||||||
| WBCnstr00042999 | |||||||||
| Construct_product | WBCnstr00042999 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (65) | |||||||||
| Map_info | Map | III | Position | -26.9143 | Error | 0.001528 | |||
| Positive | Positive_clone | Y50D7A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (24) | |||||||||
| Remark | Sequence connection from [Siddiqui SS], [krb 020711] | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
