WormBase Tree Display for Variation: WBVar00026341
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| WBVar00026341 | Name | Public_name | WBVar00026341 | ||
|---|---|---|---|---|---|
| Other_name | pas16865 | ||||
| cewivar00000750 | |||||
| CE50143:p.Asp44= | |||||
| W10C8.4c.1:c.132T>C | |||||
| CE30703:p.Asp91= | |||||
| W10C8.4a.1:c.273T>C | |||||
| HGVSg | CHROMOSOME_I:g.2852639A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | W10C8 | |
| Flanking_sequences | tgactaccgcctatttccatgcgcagtaggcacatgtgtagacataggcaggcattatcgcgcctcccttcaaactacctactaggtactaggtagttcgaaaggagacgcgataatgcctgcctatacctacacacgttcctactgcacatggaaataggcggcaggcaggcaggtggatagcttcaaggtagtgcctaccctcgcgtcatagttcttcgtcagtgttgctctcaaaattgggttcatcgctgtgttgagctcctcgagtttttgaatcactttatcaacttcttcctg | tccccacttgagcttccgtacagacctgaatttttttttcaaaatttggctttcaaaaatgaaacgatattaatctcaactttttggaaaatattaaaattgaaaaaatgtgcaagttattgtaagctcaagtgtttgcacattttcaaaactacagtaaccgagtgagatatggcacgcccacaaaaccgtgccacactattttgcaatctgcgcacggttttgaaatatatttttgcgagggcaccattttatgggcgtgaccaaaaccaaaattcggggtttttcgtgttgcaaaaa | |||
| Mapping_target | W10C8 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (19) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021127 | |||
| Transcript | W10C8.4c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | W10C8.4c.1:c.132T>C | ||||
| HGVSp | CE50143:p.Asp44= | ||||
| cDNA_position | 132 | ||||
| CDS_position | 132 | ||||
| Protein_position | 44 | ||||
| Exon_number | 3/4 | ||||
| Codon_change | gaT/gaC | ||||
| Amino_acid_change | D | ||||
| W10C8.4a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W10C8.4a.1:c.273T>C | ||||
| HGVSp | CE30703:p.Asp91= | ||||
| cDNA_position | 380 | ||||
| CDS_position | 273 | ||||
| Protein_position | 91 | ||||
| Exon_number | 5/7 | ||||
| Codon_change | gaT/gaC | ||||
| Amino_acid_change | D | ||||
| Method | WGS_Pasadena_Quinlan |
