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WormBase Tree Display for Variation: WBVar00021968

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Name Class

WBVar00021968NamePublic_nameWBVar00021968
Other_namehaw35516
haw137969
cewivar00145783
Y46E12BL.4f.1:c.49+1662A>T
Y46E12BL.4a.1:c.49+1662A>T
Y46E12BL.4i.1:c.184+1662A>T
Y46E12BL.4b.1:c.49+1662A>T
HGVSgCHROMOSOME_II:g.15209233A>T
Sequence_detailsSMapS_parentSequenceY46E12BM
Flanking_sequencesgcggcaaaaaatatgaagaaaatccataaattttgccgtaaaacgcgaaa
Mapping_targetY46E12BM
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00557834
WBVar01386500
StatusLive
AffectsGeneWBGene00021597
TranscriptY46E12BL.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4f.1:c.49+1662A>T
Intron_number1/5
Y46E12BL.4i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4i.1:c.184+1662A>T
Intron_number3/7
Y46E12BL.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4a.1:c.49+1662A>T
Intron_number1/4
Y46E12BL.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY46E12BL.4b.1:c.49+1662A>T
Intron_number1/6
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw35516
MethodWGS_Hawaiian_Waterston