WormBase Tree Display for Variation: WBVar00020408
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WBVar00020408 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00020408 | |||
Other_name | haw35204 | ||||
cewivar00102168 | |||||
Y53F4B.13c.1:c.181-22C>G | |||||
Y53F4B.13a.1:c.181-22C>G | |||||
Y53F4B.13d.1:c.181-22C>G | |||||
Y53F4B.13b.1:c.181-22C>G | |||||
HGVSg | CHROMOSOME_II:g.15026467C>G | ||||
Sequence_details | SMap | S_parent | Sequence | Y53F4B | |
Flanking_sequences | tcgatttttagggttatttttaccg | aaaaatcggtttttttttgaggtaa | |||
Mapping_target | Y53F4B | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | |||||
Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01386015 | |||
Status | Live | ||||
Affects | Gene | WBGene00013160 | |||
Transcript | Y53F4B.13a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.13a.1:c.181-22C>G | ||||
Intron_number | 3/10 | ||||
Y53F4B.13d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.13d.1:c.181-22C>G | ||||
Intron_number | 2/5 | ||||
Y53F4B.13c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.13c.1:c.181-22C>G | ||||
Intron_number | 2/5 | ||||
Y53F4B.13b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y53F4B.13b.1:c.181-22C>G | ||||
Intron_number | 2/8 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw35204 | ||||
Method | WGS_Hawaiian_Waterston |