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WormBase Tree Display for Variation: WBVar00020408

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Name Class

WBVar00020408EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00020408
Other_namehaw35204
cewivar00102168
Y53F4B.13c.1:c.181-22C>G
Y53F4B.13a.1:c.181-22C>G
Y53F4B.13d.1:c.181-22C>G
Y53F4B.13b.1:c.181-22C>G
HGVSgCHROMOSOME_II:g.15026467C>G
Sequence_detailsSMapS_parentSequenceY53F4B
Flanking_sequencestcgatttttagggttatttttaccgaaaaatcggtttttttttgaggtaa
Mapping_targetY53F4B
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01386015
StatusLive
AffectsGeneWBGene00013160
TranscriptY53F4B.13a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.13a.1:c.181-22C>G
Intron_number3/10
Y53F4B.13d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.13d.1:c.181-22C>G
Intron_number2/5
Y53F4B.13c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.13c.1:c.181-22C>G
Intron_number2/5
Y53F4B.13b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY53F4B.13b.1:c.181-22C>G
Intron_number2/8
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw35204
MethodWGS_Hawaiian_Waterston