WormBase Tree Display for Variation: WBVar00020118

WBVar00020118 Name: Public_name: WBVar00020118
    Other_name: haw35146
      Y53F4B.4a.2:c.573+339A>T
      Y53F4B.4a.1:c.573+339A>T
      Y53F4B.4b.1:c.1035+339A>T
      Y53F4B.4a.3:c.573+339A>T
      Y53F4B.4c.1:c.843+339A>T
    HGVSg: CHROMOSOME_II:g.14976157A>T
  Sequence_details: SMap: S_parent: Sequence: Y53F4B
    Flanking_sequences: taaaaatttcaggatttttcaaaaa ttaaattccagcaaaatttacaaat
    Mapping_target: Y53F4B
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_Hawaiian_Waterston
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
    Status: Live
  Affects: Gene: WBGene00013151
    Transcript: Y53F4B.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4a.1:c.573+339A>T
        Intron_number: 7/8
      Y53F4B.4a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4a.3:c.573+339A>T
        Intron_number: 5/6
      Y53F4B.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4b.1:c.1035+339A>T
        Intron_number: 6/6
      Y53F4B.4c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4c.1:c.843+339A>T
        Intron_number: 5/5
      Y53F4B.4a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4a.2:c.573+339A>T
        Intron_number: 6/7
  Remark: [20081124 db] this Variation was previously named hw35146
  Method: WGS_Hawaiian_Waterston