WormBase Tree Display for Variation: WBVar00020053

WBVar00020053 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00020053
    Other_name: haw35133
      cewivar00189459
      Y53F4B.4b.1:c.103-887C>T
      Y53F4B.4a.1:c.-360-887C>T
      Y53F4B.42.1:c.*343C>T
    HGVSg: CHROMOSOME_II:g.14971262C>T
  Sequence_details: SMap: S_parent: Sequence: Y53F4B
    Flanking_sequences: tttttggtgaaaaagtccaaaattt agaaattttggctcaaaaatgtccg
    Mapping_target: Y53F4B
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004602 From_analysis: WGS_De_Bono
          WGS_Hawaiian_Waterston
          Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00022850 From_analysis: WGS_De_Bono
    Laboratory: RW
      AX
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar01254050
        WBVar01321516
        WBVar01385899
    Status: Live
  Affects: Gene: WBGene00013151
      WBGene00044720
    Transcript: Y53F4B.42.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.42.1:c.*343C>T
        cDNA_position: 1289
        Exon_number: 4/4
      Y53F4B.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4a.1:c.-360-887C>T
        Intron_number: 1/8
      Y53F4B.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y53F4B.4b.1:c.103-887C>T
        Intron_number: 1/6
  Reference: WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw35133
  Method: WGS_Hawaiian_Waterston