WormBase Tree Display for Variation: WBVar00018226
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| WBVar00018226 | Name | Public_name | WBVar00018226 | ||
|---|---|---|---|---|---|
| Other_name | pas15242 | ||||
| snp_Y119D3B[7] | |||||
| cewivar00019941 | |||||
| CE32513:p.Leu77= | |||||
| Y119D3B.17.2:c.231C>A | |||||
| Y119D3B.17.1:c.231C>A | |||||
| HGVSg | CHROMOSOME_III:g.1221479G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y119D3B | |
| Flanking_sequences | atccttaatcttgctcccacccttcccgatcaaacttccacactgtgtcgccggcacgataaccctcatggtaatcggtggttttggtacagaattcggcagtaacagcatatcctcttcgaatttattgcaaaccatattaaaagcctttccgataacgccaagagtccccgtaatcgtcacaattctctcggggcacgagccatcggagatgttgattttcgcgccggattcttcgcgaatctttttgatttgatctccttttttgccgattatactaccgacttctttgccctgcat | aggagtcgtatggtgagcacaaggcttgtggtgcttggtgaggtttctcgtggtgagcaggaagaactggggtcgcccagtaggtggtccgatgaggttgagctgaaaaatttggaaaaattaactttttttaaaagtttcactaaaatttttcaactgaaaacttgtagccctgaaaattcagaacattttgttaattggaaactttttgatacctcaattcctagcaaagttatgaggcttcaaagttagggtgtcgcccggcagaggaaaagagtgtgcgctggggggagacgcaga | |||
| Mapping_target | Y119D3B | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (35) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01390899 | |||
| WBVar01256508 | |||||
| WBVar01323978 | |||||
| WBVar00248418 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003978 | |||
| Transcript | Y119D3B.17.2 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y119D3B.17.2:c.231C>A | ||||
| HGVSp | CE32513:p.Leu77= | ||||
| cDNA_position | 284 | ||||
| CDS_position | 231 | ||||
| Protein_position | 77 | ||||
| Exon_number | 3/10 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| Y119D3B.17.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y119D3B.17.1:c.231C>A | ||||
| HGVSp | CE32513:p.Leu77= | ||||
| cDNA_position | 231 | ||||
| CDS_position | 231 | ||||
| Protein_position | 77 | ||||
| Exon_number | 2/9 | ||||
| Codon_change | ctC/ctA | ||||
| Amino_acid_change | L | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
