WormBase Tree Display for Variation: WBVar00015123
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| WBVar00015123 | Name | Public_name | WBVar00015123 | ||
|---|---|---|---|---|---|
| Other_name | haw34147 | ||||
| F26H11.2m.1:c.4765-117A>T | |||||
| F26H11.2o.1:c.250-117A>T | |||||
| F26H11.2s.1:c.5134-117A>T | |||||
| F26H11.2d.2:c.970-117A>T | |||||
| F26H11.2l.1:c.4771-117A>T | |||||
| F26H11.2d.1:c.970-117A>T | |||||
| F26H11.2n.1:c.5134-117A>T | |||||
| F26H11.2c.1:c.5128-117A>T | |||||
| F26H11.2a.1:c.5128-117A>T | |||||
| HGVSg | CHROMOSOME_II:g.14402931A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F26H11 | |
| Flanking_sequences | tatgctgattttagtaggaaatgtt | aaaaaaaatctgaaaaatagagaaa | |||
| Mapping_target | F26H11 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00009180 | |||
| Transcript | F26H11.2o.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2o.1:c.250-117A>T | ||||
| Intron_number | 2/8 | ||||
| F26H11.2m.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2m.1:c.4765-117A>T | ||||
| Intron_number | 17/23 | ||||
| F26H11.2s.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2s.1:c.5134-117A>T | ||||
| Intron_number | 19/26 | ||||
| F26H11.2d.2 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2d.2:c.970-117A>T | ||||
| Intron_number | 19/26 | ||||
| F26H11.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2a.1:c.5128-117A>T | ||||
| Intron_number | 19/26 | ||||
| F26H11.2c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2c.1:c.5128-117A>T | ||||
| Intron_number | 19/26 | ||||
| F26H11.2n.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2n.1:c.5134-117A>T | ||||
| Intron_number | 18/24 | ||||
| F26H11.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2d.1:c.970-117A>T | ||||
| Intron_number | 6/13 | ||||
| F26H11.2l.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F26H11.2l.1:c.4771-117A>T | ||||
| Intron_number | 17/23 | ||||
| Remark | [20081124 db] this Variation was previously named hw34147 | ||||
| Method | WGS_Hawaiian_Waterston |
