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WormBase Tree Display for Variation: WBVar00014238

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Name Class

WBVar00014238NamePublic_nameWBVar00014238
Other_namehaw33970
haw136827
cewivar00189112
Y54G11A.18:n.8C>T
Y54G11A.3.1:c.647-373G>A
HGVSgCHROMOSOME_II:g.14280244G>A
Sequence_detailsSMapS_parentSequenceY54G11A
Flanking_sequencesgataatgcaaattttttattaaaaatcactgaaaatgaataaaacaagct
Mapping_targetY54G11A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_De_Bono
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01319812
WBVar00556692
WBVar01252886
WBVar01384215
StatusLive
AffectsGeneWBGene00013214
WBGene00200258
TranscriptY54G11A.3.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54G11A.3.1:c.647-373G>A
Intron_number4/7
Y54G11A.18VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScY54G11A.18:n.8C>T
cDNA_position8
Exon_number1/1
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw33970
MethodWGS_Hawaiian_Waterston