WormBase Tree Display for Variation: WBVar00014236
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| WBVar00014236 | Name | Public_name | WBVar00014236 | ||
|---|---|---|---|---|---|
| Other_name | pas14444 | ||||
| snp_C54G6[9] | |||||
| haw113137 | |||||
| cewivar00067461 | |||||
| C54G6.2a.1:c.*17C>T | |||||
| HGVSg | CHROMOSOME_I:g.1010782C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | C54G6 | |
| Flanking_sequences | tttcagaaggttaaatttatcgatttttttttttgaaatttcgaaatatcgatttcccgaaattccctcaattttccagcatttagcattcgatttttcaaaattttcagatgctcctcaactccctaccagaagaatatcgtgtggctcaccaccgaaatgcccaggacgctcaaaaaatgatctccttggacccggaaaagtgccggctcaccgatgtcacttcaaattttgatttgttatttttaaaatcgaaaatcgagaaaatccacgtggaagcctgaaaaaaacatcttccat | gtgcaccagaagaattttggtggccgaatttcggatttctaggtcatatcaaaattgtgatgttttttttttttcattattgtgattactgtcaaaacagaatgatcgacctgcaaattttgcgccgcacagaaaaagaggcggggcgtcgttttgcaaacattcggcgcgccgcgttgtacgatttttgaacaaaatgctcgattttggtgcgttttcgcacggatttctggcttccctcataaattaatatggaagagtttttgccgaactaggccaggccatatctggagtagattt | |||
| Mapping_target | C54G6 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (28) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar01295450 | |||
| WBVar00533002 | |||||
| WBVar00243867 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016931 | |||
| Transcript | C54G6.2a.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C54G6.2a.1:c.*17C>T | ||||
| cDNA_position | 1409 | ||||
| Exon_number | 10/10 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
