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WormBase Tree Display for Variation: WBVar00013378

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Name Class

WBVar00013378NamePublic_nameWBVar00013378
Other_namepas11729
haw33798
haw136709
cewivar00100786
Y48B6A.6b.1:c.481-149A>G
Y48B6A.6a.2:c.1933-149A>G
Y48B6A.6a.1:c.1933-149A>G
Y48B6A.6c.1:c.409-149A>G
HGVSgCHROMOSOME_II:g.14189370A>G
Sequence_detailsSMapS_parentSequenceY48B6A
Flanking_sequencesctttaaacaaattggaactacccttaaatattttggcaccaatattcaga
Mapping_targetY48B6A
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (24)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01252622
WBVar00106870
WBVar00556574
WBVar01383969
StatusLive
AffectsGeneWBGene00012980
TranscriptY48B6A.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48B6A.6b.1:c.481-149A>G
Intron_number3/3
Y48B6A.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48B6A.6a.1:c.1933-149A>G
Intron_number8/9
Y48B6A.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48B6A.6c.1:c.409-149A>G
Intron_number4/5
Y48B6A.6a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48B6A.6a.2:c.1933-149A>G
Intron_number9/10
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw33798
MethodWGS_Hawaiian_Waterston