WormBase Tree Display for Variation: WBVar00011965
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| WBVar00011965 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00011965 | |||
| Other_name | haw83491 | ||||
| haw170542 | |||||
| cewivar00243354 | |||||
| T09E8.1f.1:c.587+423A>G | |||||
| T09E8.1h.1:c.1280+423A>G | |||||
| T09E8.1g.1:c.299+423A>G | |||||
| T09E8.1c.1:c.1280+423A>G | |||||
| T09E8.1b.1:c.581+423A>G | |||||
| T09E8.1a.1:c.755+423A>G | |||||
| HGVSg | CHROMOSOME_V:g.13164891A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K03H4 | |
| Flanking_sequences | ctagaatgaaaaatactcggttaaa | ttttttccaaaaaataatgggatac | |||
| Mapping_target | K03H4 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00590407 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00011647 | |||
| WBGene00305503 | |||||
| Transcript | K03H4.10 | ||||
| T09E8.1h.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1h.1:c.1280+423A>G | ||||
| Intron_number | 10/16 | ||||
| T09E8.1c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1c.1:c.1280+423A>G | ||||
| Intron_number | 5/10 | ||||
| T09E8.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1a.1:c.755+423A>G | ||||
| Intron_number | 5/11 | ||||
| T09E8.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1f.1:c.587+423A>G | ||||
| Intron_number | 4/9 | ||||
| T09E8.1g.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1g.1:c.299+423A>G | ||||
| Intron_number | 4/10 | ||||
| T09E8.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T09E8.1b.1:c.581+423A>G | ||||
| Intron_number | 4/9 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw83491 | ||||
| Method | WGS_Hawaiian_Waterston |
