WormBase Tree Display for Gene: WBGene00011647
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| WBGene00011647 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | noca-1 | Person_evidence | WBPerson1816 | |||||
| Sequence_name | T09E8.1 | ||||||||
| Molecular_name (27) | |||||||||
| Other_name | CELE_T09E8.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | noca-1 | ||||||||
| DB_info | Database | AceView | gene | 5N655 | |||||
| WormQTL | gene | WBGene00011647 | |||||||
| WormFlux | gene | WBGene00011647 | |||||||
| NDB | locus_tag | CELE_T09E8.1 | |||||||
| NCBI | gene | 3565610 | |||||||
| RefSeq | protein | NM_182401.5 | |||||||
| NM_073875.5 | |||||||||
| NM_073874.7 | |||||||||
| NM_182400.7 | |||||||||
| NM_001047700.5 | |||||||||
| NM_001383436.1 | |||||||||
| NM_182399.8 | |||||||||
| NM_073873.3 | |||||||||
| NM_001316777.4 | |||||||||
| SwissProt | UniProtAcc | G5EEK3 | |||||||
| TREEFAM | TREEFAM_ID | TF316130 | |||||||
| UniProt_GCRP | UniProtAcc | G5EEK3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 05 May 2011 12:15:34 | WBPerson2970 | Name_change | CGC_name | noca-1 | ||||
| 3 | 09 Sep 2015 15:37:50 | WBPerson4025 | Event | Acquires_merge | WBGene00010549 | ||||
| Acquires_merge | WBGene00010549 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | noca | ||||||||
| Allele (445) | |||||||||
| Strain | WBStrain00037614 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Involved in cytoplasmic microtubule organization; germ cell development; and nematode larval development. Located in microtubule. Expressed in hyp7 syncytium and intestinal cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T09E8.1a | |||||||
| T09E8.1b | |||||||||
| T09E8.1c | |||||||||
| T09E8.1d | |||||||||
| T09E8.1e | |||||||||
| T09E8.1f | |||||||||
| T09E8.1g | |||||||||
| T09E8.1h | |||||||||
| T09E8.1i | |||||||||
| Corresponding_CDS_history | T09E8.1a:wp87 | ||||||||
| T09E8.1b:wp87 | |||||||||
| T09E8.1c:wp179 | |||||||||
| T09E8.1e:wp230 | |||||||||
| Corresponding_transcript | T09E8.1a.1 | ||||||||
| T09E8.1b.1 | |||||||||
| T09E8.1c.1 | |||||||||
| T09E8.1d.1 | |||||||||
| T09E8.1e.1 | |||||||||
| T09E8.1f.1 | |||||||||
| T09E8.1g.1 | |||||||||
| T09E8.1h.1 | |||||||||
| T09E8.1i.1 | |||||||||
| Other_sequence (20) | |||||||||
| Associated_feature (62) | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern (11) | |||||||||
| Drives_construct (19) | |||||||||
| Construct_product (24) | |||||||||
| Antibody | WBAntibody00002654 | ||||||||
| Microarray_results (74) | |||||||||
| Expression_cluster (199) | |||||||||
| SAGE_tag | SAGE:ttttggaaaa | Strand | Antisense | ||||||
| SAGE:agctttctta | Strand | Antisense | |||||||
| SAGE:cacaaaaaagataaaaa | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | V | Position | 4.96091 | Error | 0.002678 | |||
| Positive | Positive_clone | T09E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00042775 | ||||||||
| WBPaper00047357 | |||||||||
| WBPaper00047481 | |||||||||
| WBPaper00048540 | |||||||||
| WBPaper00048849 | |||||||||
| WBPaper00060754 | |||||||||
| WBPaper00064679 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
