WormBase Tree Display for Variation: WBVar00009140
expand all nodes | collapse all nodes | view schema
| WBVar00009140 | Name | Public_name | WBVar00009140 | ||
|---|---|---|---|---|---|
| Other_name | haw82926 | ||||
| cewivar00242700 | |||||
| W04D2.3a.1:c.281+5A>G | |||||
| W04D2.3b.1:c.281+5A>G | |||||
| HGVSg | CHROMOSOME_V:g.12489957A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | W04D2 | |
| Flanking_sequences | ccttttgaaaaaagaagagaggttt | tatatttcatttgcttattttaaat | |||
| Mapping_target | W04D2 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00002133 | |||
| Transcript | W04D2.3b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | W04D2.3b.1:c.281+5A>G | ||||
| Intron_number | 4/11 | ||||
| W04D2.3a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | W04D2.3a.1:c.281+5A>G | ||||
| Intron_number | 3/10 | ||||
| Remark | [20081124 db] this Variation was previously named hw82926 | ||||
| Method | WGS_Hawaiian_Waterston |
