WormBase Tree Display for Variation: WBVar00006821
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| WBVar00006821 | Name | Public_name | WBVar00006821 | ||
|---|---|---|---|---|---|
| Other_name | pas12961 | ||||
| haw37510 | |||||
| haw139508 | |||||
| cewivar00017974 | |||||
| B0412.1b.1:c.19-7A>C | |||||
| B0412.1a.1:c.328-7A>C | |||||
| HGVSg | CHROMOSOME_III:g.818663A>C | ||||
| Sequence_details | SMap | S_parent | Sequence | B0412 | |
| Flanking_sequences | cttcttcttcctcatcgaacaattcctcatctaacacttcttcgtccaattttctatctccatatgagtatcaagaatcctcgacctcaccacgtgacactacagattcatctggtgaatcctcgttgtcctcttctggctcttcatcttcactgaatggttcttgtaatgttgcagccaagttgatcaagttccgcgggcataacgtcgccgcttttgacataaacggcaaagaaatgatttgtttgcctcaggtatgagctttttttgtgaaaacgaaatagtctagaagacatgaga | gtttaggtgtacgaggtatttctcaaaaatatggtaggaggacttcatacggtatacactaaactcaaacggttgtacattcatccgatggtttgcaatgtagaacaggtaaaaattcttgtccactaacaaattttagaataatttgaaaattcacctgactgacaatattctaaaccaattaaataacccgtaaaagaatctgatgtttaatctcttttttaaagaaaataaaaatctctcataatccgcatgcaaatacggatattttatcgttatccttctataaaatctccacca | |||
| Mapping_target | B0412 | ||||
| Type_of_mutation | Substitution | A | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (33) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00031938 | |||
| WBVar01322490 | |||||
| WBVar00559373 | |||||
| WBVar01255195 | |||||
| WBVar01389632 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000895 | |||
| Transcript | B0412.1b.1 | VEP_consequence | splice_region_variant,intron_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | B0412.1b.1:c.19-7A>C | ||||
| Intron_number | 3/10 | ||||
| B0412.1a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | B0412.1a.1:c.328-7A>C | ||||
| Intron_number | 3/10 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
