WormBase Tree Display for Variation: WBVar00006101
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| WBVar00006101 | Name | Public_name | WBVar00006101 | ||
|---|---|---|---|---|---|
| Other_name | pas12817 | ||||
| snp_C24A1[1] | |||||
| haw37376 | |||||
| haw139400 | |||||
| cewivar00017707 | |||||
| C24A1.2a.1:c.565+939T>A | |||||
| C24A1.2b.1:c.562+939T>A | |||||
| HGVSg | CHROMOSOME_III:g.710175T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C24A1 | |
| Flanking_sequences | tttgcatgccttagagacgtcacaatttttctggaaaaatattctcacattttttgtagatcaaactgtgatgagacagcctgacaccaaatgccctaactgatccttaaaacattttgagtttcctggactatcctcctagagtttctcagcgagaaaaacggctttccaggtcacccagactgcacataattcaggaggcctgggacgttttgcagaacccccggatagttcacagttcacgcatcatctttgcgggaggcgccgcgcgcagaattctcccaaactgaaaccttttca | aatgcaaacaacgtgatgtactgtgcgcgcgcgagagccctggtggtgcgtgtgcggaagaggacgcggaaaattgttgtgtgtttgtgcaaatatgacgggtcacgcagaaacgaaatatgagatgaggaggggagggggagattttgaaaaggaaagagacagttcaggattttccggaacgtgggtctccggtaaagggttactatgtaaaacaagatcgataaaaactaaggttctgtaacgacttcgattttttgaactttacaataagaaaatgaaaattcgagtgatgtttga | |||
| Mapping_target | C24A1 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (140) | |||||
| Laboratory | QX | ||||
| AX | |||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar00243331 | |||
| WBVar01443210 | |||||
| WBVar00559265 | |||||
| WBVar00031268 | |||||
| WBVar01255001 | |||||
| WBVar01389437 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00016029 | |||
| Transcript | C24A1.2b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A1.2b.1:c.562+939T>A | ||||
| Intron_number | 4/6 | ||||
| C24A1.2a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24A1.2a.1:c.565+939T>A | ||||
| Intron_number | 5/8 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
