WormBase Tree Display for Variation: WBVar00005291
expand all nodes | collapse all nodes | view schema
| WBVar00005291 | Name | Public_name | WBVar00005291 | ||
|---|---|---|---|---|---|
| Other_name | pas12655 | ||||
| cewivar00017263 | |||||
| cTel54X.1.1:c.-81C>T | |||||
| HGVSg | CHROMOSOME_III:g.2998G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | cTel54X | |
| Flanking_sequences | cttttccaatacttgaccaaggatctctgtgggcatatcggaaagagtaggggaaatgtgatcctggctgtaacaatcaaattgccattaacccagtatttcaacaaaaaaaaactcacaaattcatatatcgcacaaaattaattgcccaccatttgtcaagttcagctccacgttcttcagtcagagcacgtcgggcttctcggctgattgttaccattttcaaaagatataatttctttaacacagaagttaaataaaatatgtccgatagcaaaaagtagatgtgaatgaattgaa | aagaactgagaaatagctaaatatctatgtcttaattttcatagagtttcattgtcagatactacaatgttactattgagaaaaatgtcaaactgataagaatagcagccagcttaaaatgaaaatttgataagaaattgctgtcttaatattaattatattgtcgtcaacaaacagaattttcacttgctagttgttagtttaaattatattttgataccgaaaagtgtttgaaaatggggggaaactagaaaataaagttttctacatattccatattttcagaattgatttcaagat | |||
| Mapping_target | cTel54X | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (17) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00008352 | |||
| Transcript | cTel54X.1.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | cTel54X.1.1:c.-81C>T | ||||
| cDNA_position | 100 | ||||
| Exon_number | 1/6 | ||||
| Method | WGS_Pasadena_Quinlan |
