WormBase Tree Display for Variation: WBVar00000071
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WBVar00000071 | Evidence | Paper_evidence | WBPaper00006439 | ||
---|---|---|---|---|---|
Name | Public_name | ad820 | |||
Other_name | ad820sd | ||||
Y105E8A.7b.1:c.77-1140G>A | |||||
Y105E8A.7e.1:c.77-1140G>A | |||||
CE33723:p.Gly60Glu | |||||
Y105E8A.7a.1:c.77-1140G>A | |||||
CE37055:p.Gly60Glu | |||||
Y105E8A.7d.2:c.179G>A | |||||
Y105E8A.7d.1:c.179G>A | |||||
Y105E8A.7c.1:c.179G>A | |||||
Y105E8A.7d.3:c.179G>A | |||||
HGVSg | CHROMOSOME_I:g.14392185G>A | ||||
Sequence_details | SMap | S_parent | Sequence | Y105E8A | |
Flanking_sequences | tagttttgattatggtgttctggctgaaag | ggtcctgcagtatgaggagtgagtttttgg | |||
Mapping_target | Y105E8A | ||||
Type_of_mutation | Substitution | g | a | ||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00005519 | ||||
WBStrain00005540 | |||||
Laboratory | DA | ||||
Status | Live | ||||
Affects | Gene | WBGene00001147 | |||
WBGene00002977 | |||||
Transcript | Y105E8A.7e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.7e.1:c.77-1140G>A | ||||
Intron_number | 1/7 | ||||
Y105E8A.7d.1 (12) | |||||
Y105E8A.7b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.7b.1:c.77-1140G>A | ||||
Intron_number | 2/15 | ||||
Y105E8A.7d.3 (12) | |||||
Y105E8A.7d.2 (12) | |||||
Y105E8A.7c.1 (12) | |||||
Y105E8A.7a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y105E8A.7a.1:c.77-1140G>A | ||||
Intron_number | 2/14 | ||||
Genetics | Interpolated_map_position | I | 24.681 | ||
Mapping_data | In_2_point | 7014 | |||
In_multi_point | 3094 | ||||
3095 | |||||
In_pos_neg_data | 8331 | ||||
8332 | |||||
8333 | |||||
8334 | |||||
8335 | |||||
8336 | |||||
Description | Phenotype (3) | ||||
Reference | WBPaper00018319 | ||||
WBPaper00002341 | |||||
WBPaper00022005 | |||||
WBPaper00056338 | |||||
Remark | Added the references from WBVar00000072 as it seems there was a data integration issue. | ||||
Method | Substitution_allele |