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WormBase Tree Display for Transgene: WBTransgene00005069

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Name Class

WBTransgene00005069Public_namewIs78
Summary[SCMp::GFP + ajm-1p::GFP + F58E10 (cosmid) + unc-119(+)]
Synonym[ajm-1::gfp + SCM::gfp + unc-119(+) + F58E10(+)]
[ajm-1::gfp]
[scm::gfp]
ConstructionConstructWBCnstr00005046
CoinjectionWBCnstr00000670
WBCnstr00001971
WBCnstr00005042
Construction_summaryReported by Hirose et al. 2013 to be mapped on LGIV. SCM reporter remark: The identity of the "SCM" promoter sequence was a mystery for a long time. A 2011 PhD thesis from Charles Brabin of Alison Woollard's lab appears to have identified the sequence as a ~7.8kb region of chromosome IV spanning the genes arf-5 ("arf-3" in the thesis), mec-17, and col-115. The sequence responsible for driving the seam cell-specific expression appears to be the 3' end of the arf-5 gene. Information regarding the sequence can be found in Chapter 5 of the thesis with the region and sequence depicted in Figure 5.1 on page 124. The thesis can be found here: https:
Genetic_informationIntegrated
MapX
Used_forExpr_patternChronogram1349
Associated_withStrainWBStrain00004750
WBStrain00022750
WBStrain00033326
WBStrain00033327
Reference (30)
SpeciesCaenorhabditis elegans