WormBase Tree Display for Transgene: WBTransgene00005069

WBTransgene00005069 Public_name: wIs78
  Summary: [SCMp::GFP + ajm-1p::GFP + F58E10 (cosmid) + unc-119(+)]
  Synonym: [ajm-1::gfp + SCM::gfp + unc-119(+) + F58E10(+)]
    [ajm-1::gfp]
    [scm::gfp]
  Construction: Construct: WBCnstr00005046
    Coinjection: WBCnstr00000670
      WBCnstr00001971
      WBCnstr00005042
  Construction_summary: Reported by Hirose et al. 2013 to be mapped on LGIV. SCM reporter remark: The identity of the "SCM" promoter sequence was a mystery for a long time. A 2011 PhD thesis from Charles Brabin of Alison Woollard's lab appears to have identified the sequence as a ~7.8kb region of chromosome IV spanning the genes arf-5 ("arf-3" in the thesis), mec-17, and col-115. The sequence responsible for driving the seam cell-specific expression appears to be the 3' end of the arf-5 gene. Information regarding the sequence can be found in Chapter 5 of the thesis with the region and sequence depicted in Figure 5.1 on page 124. The thesis can be found here: https:
  Genetic_information: Integrated
    Map: X
  Used_for: Expr_pattern: Chronogram1349
  Associated_with: Strain: WBStrain00004750
      WBStrain00022750
      WBStrain00033326
      WBStrain00033327
  Reference: WBPaper00005908
    WBPaper00006429
    WBPaper00013416
    WBPaper00024903
    WBPaper00025236
    WBPaper00026781
    WBPaper00028283
    WBPaper00029359
    WBPaper00031590
    WBPaper00033062
    WBPaper00034720
    WBPaper00037838
    WBPaper00038064
    WBPaper00039902
    WBPaper00040121
    WBPaper00040326
    WBPaper00040932
    WBPaper00041013
    WBPaper00041116
    WBPaper00042458
    WBPaper00043906
    WBPaper00044900
    WBPaper00049156
    WBPaper00050164
    WBPaper00050411
    WBPaper00054432
    WBPaper00056551
    WBPaper00057033
    WBPaper00057143
    WBPaper00059061
  Species: Caenorhabditis elegans