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WormBase Tree Display for RNAi: WBRNAi00101535

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Name Class

WBRNAi00101535HomolHomol_homolK04G2:RNAi
Sequence_infoPCR_productsjj_K04G2.8
ExperimentLaboratoryCT
Date01 Nov 2010 00:00:00
GenotypewIs78 [SCMp::GFP marker transgene for seam cells]; lit-1(RNAi)
TreatmentRNAi was induced by feeding, starting with L1 stage starved and synchronized animals. RNAi constructs were expressed from E. coli HT115(DE3) bacteria, which were grown on NGM media containing 1 mM IPTG to induce expression from the convergent T7 polymerase promoters on the pL4440 vector. All strains feeding on RNAi bacteria were cultured at 20 degrees Celsius unless otherwise noted. Simultaneous RNAi was carried out by growing the two different RNAi bacterial strains to the same optical density and mixing equal volumes of the cultures before plating onto NGM plates.
Temperature20
Delivered_byBacterial_feeding
InhibitsPredicted_geneK04G2.8cInferred_automaticallyRNAi_primary
K04G2.8bInferred_automaticallyRNAi_primary
K04G2.8aInferred_automaticallyRNAi_primary
GeneWBGene00000156Inferred_automaticallyRNAi_primary
TranscriptK04G2.8c.1Inferred_automaticallyRNAi_primary
K04G2.8b.1Inferred_automaticallyRNAi_primary
K04G2.8a.1Inferred_automaticallyRNAi_primary
SpeciesCaenorhabditis elegans
ReferenceWBPaper00037838
Phenotype_not_observedWBPhenotype:0001887Remarkapr-1(RNAi) did not have any effect on the fewer seam cells phenotype of lit-1(RNAi), suggesting that lit-1(RNAi) is epistatic to apr-1(RNAi)
WBPhenotype:0001923Remarkapr-1(RNAi) did not have any effect on the fewer seam cells phenotype of lit-1(RNAi), suggesting that lit-1(RNAi) is epistatic to apr-1(RNAi)
Remark(Table 1) apr-1 RNAi (double RNAi with lit-1; see genotype)
MethodRNAi