WormBase Tree Display for Expression_cluster: WBPaper00045401:N.parisii_34h_downregulated_N2
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| WBPaper00045401:N.parisii_34h_downregulated_N2 | Description | Genes that showed significantly decreased expression 34 hours after infection by Nematocida parisii in N2, according to Affymetrix microarray analysis. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Differentially expressed transcripts were identified using the edgeR Bioconductor package (Empirical analysis of digital gene expression data in R, v 3.0.8). FDR cutoff was set to < 0.05, which yielded lists of genes with > 4-fold difference in expression. | ||
| Reference | WBPaper00045401 | ||
| Based_on_WB_Release | |||
| Microarray_results | 190301_s_at | Fold change control vs infected: 0.469, p-value: 1.21E-06 | |
| 191541_at | Fold change control vs infected: 0.436, p-value: 1.36E-07 | ||
| 180909_at | Fold change control vs infected: 0.397, p-value: 9.19E-10 | ||
| 184707_s_at | Fold change control vs infected: 0.351, p-value: 7.69E-05 | ||
| 180945_s_at | Fold change control vs infected: 0.336, p-value: 1.46E-05 | ||
| 193149_at | Fold change control vs infected: 0.307, p-value: 3.77E-05 | ||
| Gene | WBGene00000136 | ||
| WBGene00008296 | |||
| WBGene00007867 | |||
| WBGene00007872 | |||
| WBGene00009877 | |||
| WBGene00000096 | |||
| Attribute_of | Microarray_experiment | ||
| Regulation | Regulated_by_treatment | Microsporidia: Nematocida parisii | |
| Associated_with | Life_stage | WBls:0000057 |
