WormBase Tree Display for Expression_cluster: WBPaper00040998:nhr-66_regulated
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| WBPaper00040998:nhr-66_regulated | Description | Differentially expressed genes in nhr-66(ok940) compared to wild-type animals using microarray analysis. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | Pair-wise significance testing (mutant vs. wild-type) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Criteria for differential expression was set by employing log2(ratio) >= 0.848 and p-value < 0.001. | ||
| Reference | WBPaper00040998 | ||
| Microarray_results | cea2.i.48948 | Fold change: 138.141214272567, p-value: 1.82E-09 | |
| cea2.i.03172 | Fold change: 48.1678959171541, p-value: 4.70E-09 | ||
| cea2.i.31956 | Fold change: 38.5858504861043, p-value: 3.22E-08 | ||
| cea2.i.06753 | Fold change: 9.12610972694739, p-value: 4.18E-08 | ||
| cea2.c.38150 | Fold change: 0.0167464603521296, p-value: 6.04E-08 | ||
| cea2.i.36289 | Fold change: 5.46416102701758, p-value: 4.40E-07 | ||
| cea2.i.06720 | Fold change: 16.2233516766405, p-value: 4.74E-07 | ||
| cea2.i.38647 | Fold change: 4.65893434587382, p-value: 8.31E-07 | ||
| cea2.p.158384 | Fold change: 4.28709385014517, p-value: 1.07E-06 | ||
| cea2.i.32048 | Fold change: 9.78112222153655, p-value: 1.49E-06 | ||
| cea2.i.30269 | Fold change: 5.42641730979069, p-value: 1.59E-06 | ||
| cea2.i.31736 | Fold change: 15.6707247613908, p-value: 2.79E-06 | ||
| cea2.d.01787 | Fold change: 7.21000370088664, p-value: 3.37E-06 | ||
| cea2.i.27460 | Fold change: 4.69133979692752, p-value: 3.31E-06 | ||
| cea2.c.38832 | Fold change: 0.0947322854068999, p-value: 4.05E-06 | ||
| cea2.i.32177 | Fold change: 5.9380942825162, p-value: 5.39E-06 | ||
| cea2.i.11595 | Fold change: 4.62675273562115, p-value: 5.10E-06 | ||
| cea2.i.02605 | Fold change: 16.6794521734579, p-value: 7.14E-06 | ||
| cea2.d.29913 | Fold change: 5.13370359025162, p-value: 1.00E-05 | ||
| cea2.i.08369 | Fold change: 4.08404850282877, p-value: 1.71E-05 | ||
| cea2.p.47251 | Fold change: 2.88785839104499, p-value: 2.12E-05 | ||
| cea2.d.48138 | Fold change: 0.203063099089059, p-value: 2.84E-05 | ||
| cea2.i.32798 | Fold change: 3.81055199217575, p-value: 3.62E-05 | ||
| cea2.p.48441 | Fold change: 3.09512998708478, p-value: 3.40E-05 | ||
| cea2.d.48143 | Fold change: 0.353553390593274, p-value: 3.53E-05 | ||
| cea2.p.115997 | Fold change: 2.60268371088387, p-value: 7.03E-05 | ||
| cea2.d.00021 | Fold change: 0.406126198178118, p-value: 8.02E-05 | ||
| cea2.d.30172 | Fold change: 4.19886673449227, p-value: 8.45E-05 | ||
| cea2.d.14571 | Fold change: 0.307786103336229, p-value: 9.75E-05 | ||
| cea2.p.38566 | Fold change: 2.29739670999407, p-value: 0.000102 | ||
| cea2.p.127324 | Fold change: 2.20381023175322, p-value: 0.000117 | ||
| cea2.i.07449 | Fold change: 0.0669858414085183, p-value: 0.000116 | ||
| cea2.c.49413 | Fold change: 2.31337636781057, p-value: 0.000127 | ||
| cea2.d.23620 | Fold change: 0.435275281648062, p-value: 0.000135 | ||
| cea2.p.93077 | Fold change: 2.51402674904366, p-value: 0.000144 | ||
| cea2.c.09458 | Fold change: 2.09943336724613, p-value: 0.000151 | ||
| cea2.p.112433 | Fold change: 2.54912125463852, p-value: 0.000179 | ||
| cea2.p.157756 | Fold change: 2.28152743173685, p-value: 0.000193 | ||
| cea2.d.65625 | Fold change: 2.11403608112276, p-value: 0.000202 | ||
| cea2.d.41903 | Fold change: 3.05251841792112, p-value: 0.000218 | ||
| cea2.d.47046 | Fold change: 3.63007662126864, p-value: 0.000237 | ||
| cea2.i.33937 | Fold change: 0.203063099089059, p-value: 0.000277 | ||
| cea2.p.110949 | Fold change: 2.05622765331213, p-value: 0.000265 | ||
| cea2.p.158399 | Fold change: 2.86791049603165, p-value: 0.000272 | ||
| cea2.d.39379 | Fold change: 3.89061978964914, p-value: 0.000297 | ||
| cea2.p.38384 | Fold change: 2.32946717293691, p-value: 0.000311 | ||
| cea2.d.05343 | Fold change: 2.62078680771673, p-value: 0.000307 | ||
| cea2.i.30277 | Fold change: 10.7778686149255, p-value: 0.000319 | ||
| cea2.d.04924 | Fold change: 1.95884059517385, p-value: 0.000332 | ||
| cea2.3.07963 | Fold change: 3.50642288526414, p-value: 0.000397 | ||
| cea2.i.12394 | Fold change: 2.18858740252148, p-value: 0.000395 | ||
| cea2.i.54612 | Fold change: 1.91852823865053, p-value: 0.000422 | ||
| cea2.d.14568 | Fold change: 0.267943365634073, p-value: 0.000437 | ||
| cea2.d.47041 | Fold change: 3.18214593501967, p-value: 0.000445 | ||
| cea2.p.90496 | Fold change: 3.2265670368885, p-value: 0.000555 | ||
| cea2.c.06773 | Fold change: 0.406126198178118, p-value: 0.000549 | ||
| cea2.i.59795 | Fold change: 2.23457427614444, p-value: 0.000627 | ||
| cea2.i.48201 | Fold change: 1.97246540898672, p-value: 0.000622 | ||
| cea2.p.119644 | Fold change: 1.91852823865053, p-value: 0.000645 | ||
| cea2.3.30545 | Fold change: 2.32946717293691, p-value: 0.000718 | ||
| cea2.c.34112 | Fold change: 1.95884059517385, p-value: 0.000752 | ||
| cea2.i.39301 | Fold change: 1.81503831063432, p-value: 0.000767 | ||
| cea2.p.146457 | Fold change: 1.87904549842802, p-value: 0.000763 | ||
| cea2.d.08064 | Fold change: 8.63382589203542, p-value: 0.000774 | ||
| cea2.c.26547 | Fold change: 2.02791895958006, p-value: 0.000832 | ||
| cea2.p.113075 | Fold change: 0.435275281648062, p-value: 0.000844 | ||
| cea2.p.61535 | Fold change: 1.81503831063432, p-value: 0.000878 | ||
| cea2.d.13143 | Fold change: 0.435275281648062, p-value: 0.000927 | ||
| cea2.p.117903 | Fold change: 2.54912125463852, p-value: 0.00092 | ||
| cea2.c.50260 | Fold change: 0.101531549544529, p-value: 0.000953 | ||
| Gene (65) | |||
| Attribute_of | Microarray_experiment | WBPaper00040998:nhr-66_vs_WT_rep1 | |
| WBPaper00040998:nhr-66_vs_WT_rep2 | |||
| WBPaper00040998:nhr-66_vs_WT_rep3 | |||
| Regulation | Regulated_by_gene | WBGene00003656 | |
| Associated_with | Life_stage | WBls:0000038 |
