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WormBase Tree Display for Expression_cluster: WBPaper00040998:nhr-66_regulated

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Name Class

WBPaper00040998:nhr-66_regulatedDescriptionDifferentially expressed genes in nhr-66(ok940) compared to wild-type animals using microarray analysis.
SpeciesCaenorhabditis elegans
AlgorithmPair-wise significance testing (mutant vs. wild-type) was performed using the Bioconductor package limma and p-values were initially corrected for multiple testing using the false discovery rate (FDR) method of Benjamini and Hochberg. Criteria for differential expression was set by employing log2(ratio) >= 0.848 and p-value < 0.001.
ReferenceWBPaper00040998
Microarray_resultscea2.i.48948Fold change: 138.141214272567, p-value: 1.82E-09
cea2.i.03172Fold change: 48.1678959171541, p-value: 4.70E-09
cea2.i.31956Fold change: 38.5858504861043, p-value: 3.22E-08
cea2.i.06753Fold change: 9.12610972694739, p-value: 4.18E-08
cea2.c.38150Fold change: 0.0167464603521296, p-value: 6.04E-08
cea2.i.36289Fold change: 5.46416102701758, p-value: 4.40E-07
cea2.i.06720Fold change: 16.2233516766405, p-value: 4.74E-07
cea2.i.38647Fold change: 4.65893434587382, p-value: 8.31E-07
cea2.p.158384Fold change: 4.28709385014517, p-value: 1.07E-06
cea2.i.32048Fold change: 9.78112222153655, p-value: 1.49E-06
cea2.i.30269Fold change: 5.42641730979069, p-value: 1.59E-06
cea2.i.31736Fold change: 15.6707247613908, p-value: 2.79E-06
cea2.d.01787Fold change: 7.21000370088664, p-value: 3.37E-06
cea2.i.27460Fold change: 4.69133979692752, p-value: 3.31E-06
cea2.c.38832Fold change: 0.0947322854068999, p-value: 4.05E-06
cea2.i.32177Fold change: 5.9380942825162, p-value: 5.39E-06
cea2.i.11595Fold change: 4.62675273562115, p-value: 5.10E-06
cea2.i.02605Fold change: 16.6794521734579, p-value: 7.14E-06
cea2.d.29913Fold change: 5.13370359025162, p-value: 1.00E-05
cea2.i.08369Fold change: 4.08404850282877, p-value: 1.71E-05
cea2.p.47251Fold change: 2.88785839104499, p-value: 2.12E-05
cea2.d.48138Fold change: 0.203063099089059, p-value: 2.84E-05
cea2.i.32798Fold change: 3.81055199217575, p-value: 3.62E-05
cea2.p.48441Fold change: 3.09512998708478, p-value: 3.40E-05
cea2.d.48143Fold change: 0.353553390593274, p-value: 3.53E-05
cea2.p.115997Fold change: 2.60268371088387, p-value: 7.03E-05
cea2.d.00021Fold change: 0.406126198178118, p-value: 8.02E-05
cea2.d.30172Fold change: 4.19886673449227, p-value: 8.45E-05
cea2.d.14571Fold change: 0.307786103336229, p-value: 9.75E-05
cea2.p.38566Fold change: 2.29739670999407, p-value: 0.000102
cea2.p.127324Fold change: 2.20381023175322, p-value: 0.000117
cea2.i.07449Fold change: 0.0669858414085183, p-value: 0.000116
cea2.c.49413Fold change: 2.31337636781057, p-value: 0.000127
cea2.d.23620Fold change: 0.435275281648062, p-value: 0.000135
cea2.p.93077Fold change: 2.51402674904366, p-value: 0.000144
cea2.c.09458Fold change: 2.09943336724613, p-value: 0.000151
cea2.p.112433Fold change: 2.54912125463852, p-value: 0.000179
cea2.p.157756Fold change: 2.28152743173685, p-value: 0.000193
cea2.d.65625Fold change: 2.11403608112276, p-value: 0.000202
cea2.d.41903Fold change: 3.05251841792112, p-value: 0.000218
cea2.d.47046Fold change: 3.63007662126864, p-value: 0.000237
cea2.i.33937Fold change: 0.203063099089059, p-value: 0.000277
cea2.p.110949Fold change: 2.05622765331213, p-value: 0.000265
cea2.p.158399Fold change: 2.86791049603165, p-value: 0.000272
cea2.d.39379Fold change: 3.89061978964914, p-value: 0.000297
cea2.p.38384Fold change: 2.32946717293691, p-value: 0.000311
cea2.d.05343Fold change: 2.62078680771673, p-value: 0.000307
cea2.i.30277Fold change: 10.7778686149255, p-value: 0.000319
cea2.d.04924Fold change: 1.95884059517385, p-value: 0.000332
cea2.3.07963Fold change: 3.50642288526414, p-value: 0.000397
cea2.i.12394Fold change: 2.18858740252148, p-value: 0.000395
cea2.i.54612Fold change: 1.91852823865053, p-value: 0.000422
cea2.d.14568Fold change: 0.267943365634073, p-value: 0.000437
cea2.d.47041Fold change: 3.18214593501967, p-value: 0.000445
cea2.p.90496Fold change: 3.2265670368885, p-value: 0.000555
cea2.c.06773Fold change: 0.406126198178118, p-value: 0.000549
cea2.i.59795Fold change: 2.23457427614444, p-value: 0.000627
cea2.i.48201Fold change: 1.97246540898672, p-value: 0.000622
cea2.p.119644Fold change: 1.91852823865053, p-value: 0.000645
cea2.3.30545Fold change: 2.32946717293691, p-value: 0.000718
cea2.c.34112Fold change: 1.95884059517385, p-value: 0.000752
cea2.i.39301Fold change: 1.81503831063432, p-value: 0.000767
cea2.p.146457Fold change: 1.87904549842802, p-value: 0.000763
cea2.d.08064Fold change: 8.63382589203542, p-value: 0.000774
cea2.c.26547Fold change: 2.02791895958006, p-value: 0.000832
cea2.p.113075Fold change: 0.435275281648062, p-value: 0.000844
cea2.p.61535Fold change: 1.81503831063432, p-value: 0.000878
cea2.d.13143Fold change: 0.435275281648062, p-value: 0.000927
cea2.p.117903Fold change: 2.54912125463852, p-value: 0.00092
cea2.c.50260Fold change: 0.101531549544529, p-value: 0.000953
GeneWBGene00013939
WBGene00010166
WBGene00006418
WBGene00013450
WBGene00020237
WBGene00008673
WBGene00022040
WBGene00018189
WBGene00015152
WBGene00021580
WBGene00014009
WBGene00000266
WBGene00019660
WBGene00020862
WBGene00015257
WBGene00009192
WBGene00009616
WBGene00010202
WBGene00015199
WBGene00014185
WBGene00015574
WBGene00012201
WBGene00003664
WBGene00009432
WBGene00015052
WBGene00003094
WBGene00007770
WBGene00009397
WBGene00012346
WBGene00014183
WBGene00020033
WBGene00018051
WBGene00009877
WBGene00015455
WBGene00008634
WBGene00006950
WBGene00020040
WBGene00000028
WBGene00004171
WBGene00007806
WBGene00004003
WBGene00020039
WBGene00020613
WBGene00009355
WBGene00020267
WBGene00021582
WBGene00000556
WBGene00017103
WBGene00018380
WBGene00010034
WBGene00003663
WBGene00004170
WBGene00045208
WBGene00021035
WBGene00013587
WBGene00019105
WBGene00016048
WBGene00009806
WBGene00004127
WBGene00012051
WBGene00004995
WBGene00001387
WBGene00008655
WBGene00018760
WBGene00016782
Attribute_ofMicroarray_experimentWBPaper00040998:nhr-66_vs_WT_rep1
WBPaper00040998:nhr-66_vs_WT_rep2
WBPaper00040998:nhr-66_vs_WT_rep3
RegulationRegulated_by_geneWBGene00003656
Associated_withLife_stageWBls:0000038