WormBase Tree Display for Expression_cluster: WBPaper00039866:SAM_daf-19_upregulated

WBPaper00039866:SAM_daf-19_upregulated Description: Candidate daf-19 up regulated genes with a statistically significant signal variation of 1.5-fold or greater. These were identified using a Significance Analysis of Microarrays (SAM).
  Species: Caenorhabditis elegans
  Algorithm: Lists of genes were generated using SAM (version 2.2) with a false discovery rate (FDR) of less than or equal to 5% (Q-value <= 5%). Twenty-seven repeated runs of SAM were performed using variable random seed numbers for each run. During each run of SAM, 100 permutations were performed. Genes (n =129 downregulated, n = 1 upregulated) appearing in at least 80% of all twenty-seven runs of SAM were further considered for signal variation filtering, which was used to selectively identify genes with a 1.5-fold or greater variation between the two genetic conditions used for comparison.
  Reference: WBPaper00039866
  Microarray_results: 188282_at Fold change(Up): 4.3
    173687_s_at Fold change(Up): 4.3
    192266_s_at Fold change(Up): 3.9
    178132_at Fold change(Up): 3.9
    173163_s_at Fold change(Up): 3.7
    191219_at Fold change(Up): 3.7
    176055_at Fold change(Up): 3.6
    173200_s_at Fold change(Up): 3.5
    184927_s_at Fold change(Up): 3.5
    190344_at Fold change(Up): 3.4
    176618_at Fold change(Up): 3.3
    175162_s_at Fold change(Up): 3.2
    189087_s_at Fold change(Up): 3.0
    192010_s_at Fold change(Up): 3.0
    181249_at Fold change(Up): 3.0
    193344_at Fold change(Up): 2.9
    190356_at Fold change(Up): 2.9
    180642_at Fold change(Up): 2.9
    188634_s_at Fold change(Up): 2.8
    191626_s_at Fold change(Up): 2.7
    181932_at Fold change(Up): 2.7
    186342_at Fold change(Up): 2.7
    191800_at Fold change(Up): 2.6
    187318_at Fold change(Up): 2.6
    190958_s_at Fold change(Up): 2.6
    187193_at Fold change(Up): 2.6
    184676_s_at Fold change(Up): 2.6
    191607_s_at Fold change(Up): 2.5
    189986_at Fold change(Up): 2.5
    179206_at Fold change(Up): 2.5
    175918_at Fold change(Up): 2.4
    189460_at Fold change(Up): 2.4
    172772_x_at Fold change(Up): 2.4
    182513_at Fold change(Up): 2.4
    178376_s_at Fold change(Up): 2.4
    172287_x_at Fold change(Up): 2.4
    189915_s_at Fold change(Up): 2.4
    171941_s_at Fold change(Up): 2.4
    178775_at Fold change(Up): 2.4
    171947_x_at Fold change(Up): 2.4
    191394_s_at Fold change(Up): 2.4
    175636_at Fold change(Up): 2.4
    176668_at Fold change(Up): 2.3
    175681_at Fold change(Up): 2.3
    187926_s_at Fold change(Up): 2.3
    177209_at Fold change(Up): 2.3
    177549_s_at Fold change(Up): 2.3
    172434_at Fold change(Up): 2.2
    190966_at Fold change(Up): 2.2
    180263_s_at Fold change(Up): 2.2
    184160_at Fold change(Up): 2.2
    179107_s_at Fold change(Up): 2.2
    192259_s_at Fold change(Up): 2.2
    174886_at Fold change(Up): 2.2
    184992_at Fold change(Up): 2.2
    174252_at Fold change(Up): 2.1
    171736_x_at Fold change(Up): 2.1
    192568_at Fold change(Up): 2.1
    187626_s_at Fold change(Up): 2.1
    188252_at Fold change(Up): 2.1
    174751_at Fold change(Up): 2.0
    174407_at Fold change(Up): 2.0
    179302_at Fold change(Up): 1.8
  Gene (60)
  Attribute_of: Microarray_experiment (12)
  Regulation: Regulated_by_gene: WBGene00000914
  Associated_with: Life_stage: WBls:0000020