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WormBase Tree Display for Gene: WBGene00280007

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Name Class

WBGene00280007SMapS_parentSequencePPA_ChrIV
IdentityVersion1
NameSequence_namePPA41638
Molecular_namePPA41638
PPA41638.1
PP53689
Public_namePPA41638
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000321.09134From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.36378From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Ortholog (17)
ParalogWBGene00203088Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276298Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276541Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279294Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281098Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281099Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093063Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00095974Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096298Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00272028Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Collagen triple helix repeat; Serpentine type 7TM GPCR chemoreceptor Sri; 7TM GPCR, serpentine chemoreceptor class i (Sri); and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans col-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA41638
Corresponding_transcriptPPA41638.1
Other_sequenceASC33089_1
FE914849.1
FE912341.1
FE913863.1
FE914782.1
Experimental_infoMicroarray_resultsGPL14372_Probes_89690
MethodGene