WormBase Tree Display for Gene: WBGene00277444

WBGene00277444 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 6
    Name: CGC_name: Ppa-apm-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA39075
      Molecular_name: PPA39075
        PPA39075.1
        PP67489
      Public_name: Ppa-apm-3
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-apm-3
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-apm-3
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-apm-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: apm
    RNASeq_FPKM: WBls:0000032 3.08941 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.1928 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.08941 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        36.489 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00283710
      00283711
      00283712
    Ortholog (28)
    Paralog: WBGene00095686 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204547 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274340 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305187 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of clathrin adaptor complex. Is an ortholog of C. elegans apm-3. In C. elegans, apm-3 is involved in lipid storage and lysosome organization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA39075
    Corresponding_transcript: PPA39075.1
    Other_sequence (63)
  Experimental_info: Microarray_results: GPL14372_Probes_63309
      GPL14372_Probes_63310
      GPL14372_Probes_63311
      GPL14372_Probes_63312
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-apm-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-apm-3 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene