WormBase Tree Display for Gene: WBGene00273592

WBGene00273592 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 6
    Name: CGC_name: Ppa-ttc-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA35223
      Molecular_name: PPA35223
        PPA35223.1
        PP60018
      Public_name: Ppa-ttc-4
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-ttc-4
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-ttc-4
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-ttc-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttc
    RNASeq_FPKM: WBls:0000032 6.30548 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 4.5843 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        6.30548 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        7.44743 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog (28)
    Paralog: WBGene00092142 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097627 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00114420 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117732 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276807 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278157 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279304 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279311 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281717 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Tetratricopeptide repeat and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans ttc-4. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA35223
    Corresponding_transcript: PPA35223.1
    Other_sequence: HBC11482_1
      Acan_isotig10277
      Oden_isotig14497
      PPC00768_1
      Hbac_isotig01885
      CJC06310_1
      ES411249.1
      Oden_isotig14496
      JI172359.1
      PP00271
  Experimental_info: Microarray_results: GPL14372_Probes_40466
      GPL14372_Probes_40467
      GPL14372_Probes_40468
  Remark: [190208 pad] The CGC name Ppa-ttc-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-ttc-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene