WormBase Tree Display for Gene: WBGene00248048

WBGene00248048 SMap: S_parent: Sequence: OVOC_OM4_121
  Identity: Version: 2
    Name: CGC_name: Ovo-cpn-2 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC11239
      Molecular_name: OVOC11239
        OVOC11239.1
        OVP06384
      Public_name: Ovo-cpn-2
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:34 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:34 WBPerson4055 Name_change: CGC_name: Ovo-cpn-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM: WBls:0000101 17.5425 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
        6.60417 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
      WBls:0000104 (16)
      WBls:0000107 18.534 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 18.4266 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
        26.4511 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        4.56952 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        56.3571 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
      WBls:0000664 20.2111 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        34.3768 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        6.04549 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    Ortholog: WBGene00159661 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00029225 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00223281 Brugia malayi From_analysis: WormBase-Compara
      WBGene00000778 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00131242 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g7174 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g286 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21314 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18321 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17504 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25608 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g875 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8426 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g28510 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g22512 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00630.g12977 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cpn-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold605.g5606 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00467.g11758 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_14341 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_008142 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02033 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g18996 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20002100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00064707 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00108049 Pristionchus pacificus From_analysis: WormBase-Compara
      chrII_pilon.g3093 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00267635 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285365 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00237446 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237667 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00237669 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00239807 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00243222 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00248765 Onchocerca volvulus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC11239
    Corresponding_transcript: OVOC11239.1
    Other_sequence (49)
  Method: Gene