WormBase Tree Display for Gene: WBGene00235271
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| WBGene00235271 | SMap | S_parent | Sequence | C49C8 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | C49C8.8 | ||||||
| Molecular_name | C49C8.8 | |||||||
| C49C8.8.1 | ||||||||
| CE49090 | ||||||||
| Other_name | CELE_C49C8.8 | Accession_evidence | NDB | BX284604 | ||||
| Public_name | C49C8.8 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_C49C8.8 | ||||
| NCBI | gene | 24104336 | ||||||
| RefSeq | protein | NM_001307489.2 | ||||||
| TrEMBL | UniProtAcc | U4PBF0 | ||||||
| UniProt_GCRP | UniProtAcc | U4PBF0 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 04 Sep 2013 12:03:41 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (14) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (13) | ||||||||
| Paralog | WBGene00016766 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
| Structured_description | Automated_description | Enriched in head mesodermal cell; intestine; neuronal sheath cell; neurons; and retrovesicular ganglion based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including skn-1; eat-2; and elt-2 based on RNA-seq and microarray studies. Is affected by nine chemicals including Sodium Chloride; metformin; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | C49C8.8 | ||||||
| Corresponding_transcript | C49C8.8.1 | |||||||
| Experimental_info | RNAi_result | WBRNAi00029977 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00103219 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00042790 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00070907 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00012132 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00042789 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00029974 | Inferred_automatically | RNAi_primary | ||||||
| WBRNAi00070906 | Inferred_automatically | RNAi_primary | ||||||
| Expr_pattern | Expr2001775 | |||||||
| Expr2020003 | ||||||||
| Microarray_results | SMD_C49C8.2 | |||||||
| 180303_at | ||||||||
| Aff_C49C8.2 | ||||||||
| GPL19516_CGZ0009799 | ||||||||
| GPL21109_C49C8.8 | ||||||||
| GPL9450_C49C8.2 | ||||||||
| cea2.i.24693 | ||||||||
| Expression_cluster (91) | ||||||||
| SAGE_tag | SAGE:atcacaattt | Strand | Sense | |||||
| Unambiguously_mapped | ||||||||
| SAGE:tcggatagtc | Strand | Antisense | ||||||
| SAGE:atcacaattttaataca | Strand | Sense | ||||||
| Unambiguously_mapped | ||||||||
| Map_info | Positive | Positive_clone | C49C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | IV | 3.92722 | ||||||
| Method | Gene |
