WormBase Tree Display for Gene: WBGene00226094
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WBGene00226094 | SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | ||
---|---|---|---|---|---|---|
Identity | Version | 7 | ||||
Name | CGC_name | Bma-unc-40 | From_analysis | Inferred_from_orthology | ||
Sequence_name | Bm5833 | |||||
Molecular_name | Bm5833 | |||||
Bm5833.1 | ||||||
BM45234 | ||||||
Other_name | TAG5833 | Curator_confirmed | WBPerson4055 | |||
Bm1_41685A | Curator_confirmed | WBPerson4055 | ||||
Bm1_41690A | Curator_confirmed | WBPerson4055 | ||||
TAG14354 | ||||||
Bm1_41685 | Person_evidence | WBPerson5841 | ||||
Bm1_41690 | Person_evidence | WBPerson5841 | ||||
Public_name | Bma-unc-40 | |||||
Species | Brugia malayi | |||||
History | Version_change (7) | |||||
Acquires_merge | WBGene00234615 | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
RNASeq_FPKM (11) | ||||||
Ortholog (36) | ||||||
Paralog | WBGene00222569 | Brugia malayi | From_analysis | WormBase-Compara | ||
WBGene00222637 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00223169 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00225216 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00227085 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00227726 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00228273 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00228483 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00231083 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00269356 | Brugia malayi | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans unc-40. In C. elegans, unc-40 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm5833 | ||||
Corresponding_transcript | Bm5833.1 | |||||
Other_sequence | JI164718.1 | |||||
OF01647 | ||||||
BMC01788 | ||||||
Oden_isotig09046 | ||||||
Dviv_isotig07003 | ||||||
Oden_isotig09047 | ||||||
JI215953.1 | ||||||
JI225605.1 | ||||||
FG349773.1 | ||||||
CRC04451_1 | ||||||
CB832639.1 | ||||||
Dviv_isotig07005 | ||||||
ACC32859_1 | ||||||
JI472611.1 | ||||||
Dviv_isotig07004 | ||||||
Oden_isotig09048 | ||||||
JI164672.1 | ||||||
CBC04695_1 | ||||||
WBC00389_1 | ||||||
DVC00509_1 | ||||||
ACC39883_1 | ||||||
JI481633.1 | ||||||
FC547675.1 | ||||||
Tcir_isotig14540 | ||||||
FC554101.1 | ||||||
Acan_isotig08978 | ||||||
EV852868.1 | ||||||
CRC08838_1 | ||||||
CD374453.1 | ||||||
CR00445 | ||||||
JI460889.1 | ||||||
Dviv_isotig07002 | ||||||
JI211837.1 | ||||||
Tcol_isotig20894 | ||||||
FG353459.1 | ||||||
Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P5 | ||||
WBPaper00049974:ivermectin_100nM_48h_upregulated | ||||||
WBPaper00051007:downregulated_F120_vs_F30 | ||||||
WBPaper00051007:downregulated_M120_vs_F120 | ||||||
WBPaper00061765:L3_vs_Adult_Upregulated | ||||||
WBPaper00061765:L4_vs_Adult_Upregulated | ||||||
WBPaper00061765:L4_vs_Micro_Upregulated | ||||||
Reference | WBPaper00045439 | |||||
WBPaper00048750 | ||||||
Remark | [190208 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[200603 pad] The CGC name Bma-unc-40 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |