WormBase Tree Display for Gene: WBGene00217407
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WBGene00217407 | SMap | S_parent | Sequence | Cjap.Contig18199 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | Cjp-unc-55.1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | CJA41559 | ||||||||
Molecular_name | CJA41559 | ||||||||
CJA41559.1 | |||||||||
JA50160 | |||||||||
Public_name | Cjp-unc-55.1 | ||||||||
Species | Caenorhabditis japonica | ||||||||
History | Version_change | 1 | 28 Jul 2011 11:15:56 | WBPerson4055 | Event | Imported | Augustus import | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Cjp-unc-55.1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000004 | 0 | From_analysis (3) | ||||||
WBls:0000027 | 0 | From_analysis (3) | |||||||
WBls:0000038 | 0 | From_analysis (4) | |||||||
WBls:0000041 | 0.048326 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959 | ||||||
0.756951 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960 | |||||||
0.971771 | From_analysis | RNASeq.japonica.WBls:0000041.control_median | |||||||
1.0363 | From_analysis | RNASeq.japonica.WBls:0000041.control_mean | |||||||
1.18659 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961 | |||||||
1.9308 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964 | |||||||
0 | From_analysis (2) | ||||||||
2.06788 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963 | |||||||
2.29983 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962 | |||||||
WBls:0000101 | 0.637721 | From_analysis | RNASeq.japonica.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.japonica.total_over_all_stages.control_median | |||||||
Ortholog (24) | |||||||||
Paralog (105) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Nuclear hormone receptor-like domain superfamily; Ligand-binding domain of nuclear hormone receptor; and Nuclear hormone receptor, ligand-binding domain. Is an ortholog of C. elegans unc-55. In C. elegans, unc-55 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | CJA41559 | |||||||
Corresponding_transcript | CJA41559.1 | ||||||||
Other_sequence | CJC05575_1 | ||||||||
Experimental_info | Expr_pattern | Expr1085350 | |||||||
Microarray_results | GPL14145_CJA18277_363-422_0.914_6_A | ||||||||
GPL14145_CJA18277_676-735_0.754_41_B | |||||||||
Method | Gene |