WormBase Tree Display for Gene: WBGene00217407

WBGene00217407 SMap: S_parent: Sequence: Cjap.Contig18199
  Identity: Version: 2
    Name: CGC_name: Cjp-unc-55.1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA41559
      Molecular_name: CJA41559
        CJA41559.1
        JA50160
      Public_name: Cjp-unc-55.1
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:56 WBPerson4055 Event: Imported: Augustus import
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-unc-55.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 0 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
            RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.048326 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.756951 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.971771 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.0363 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.18659 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.9308 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
            RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.06788 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.29983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 0.637721 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog: WBGene00006790 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00030075 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00070440 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00140269 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00184992 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223242 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g6048 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2915 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1717 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g11899 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g9324 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14209 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00015.g1007 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g1550 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold498.g2228 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00462.g11688 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13170 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000420 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g13622 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g19416 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10073100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1475 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242085 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00288616 Trichuris muris From_analysis: WormBase-Compara
    Paralog (105)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Nuclear hormone receptor-like domain superfamily; Ligand-binding domain of nuclear hormone receptor; and Nuclear hormone receptor, ligand-binding domain. Is an ortholog of C. elegans unc-55. In C. elegans, unc-55 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA41559
    Corresponding_transcript: CJA41559.1
    Other_sequence: CJC05575_1
  Experimental_info: Expr_pattern: Expr1085350
    Microarray_results: GPL14145_CJA18277_363-422_0.914_6_A
      GPL14145_CJA18277_676-735_0.754_41_B
  Method: Gene