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WormBase Tree Display for Gene: WBGene00207557

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Name Class

WBGene00207557SMapS_parentSequenceCjap.Contig8074
IdentityVersion1
NameSequence_nameCJA31710
Molecular_nameCJA31710a
CJA31710a.1
JA67135
CJA31710b
JA62003
CJA31710b.1
Public_nameCJA31710
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:55WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000042.94974From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.93276From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.44921From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
3.02522From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
3.60123From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.956005From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.57606From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.96399From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.06734From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.10205From_analysisRNASeq.japonica.WBls:0000041.control_median
2.13676From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.29802From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.46876From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
3.32048From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.89473From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
WBls:00001012.409From_analysisRNASeq.japonica.total_over_all_stages.control_mean
2.44921From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00232237
Ortholog (30)
ParalogWBGene00136408Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00122925Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00123562Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127321Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128897Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130752Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131351Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00181081Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219202Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in regulation of DNA-templated transcription and transforming growth factor beta receptor signaling pathway. Is an ortholog of C. elegans sma-3. In C. elegans, sma-3 is involved in several processes, including defense response to other organism; male anatomical structure morphogenesis; and regulation of developmental process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA31710a
CJA31710b
Corresponding_transcriptCJA31710a.1
CJA31710b.1
Other_sequenceJI168263.1
EX501626.1
EX911982.1
HBC08446_1
TCC00507_1
TSC13645_1
TX02054
MethodGene