WormBase Tree Display for Gene: WBGene00123562

WBGene00123562 SMap: S_parent: Sequence: Cjap.Contig17319
  Identity: Version: 2
    Name: CGC_name: Cjp-sma-2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA04358
      Molecular_name: CJA04358
        CJA04358.1
        JA24089
      Public_name: Cjp-sma-2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-sma-2
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sma
    RNASeq_FPKM: WBls:0000004 5.63275 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 5.68193 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 8.01444 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        8.43464 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        8.85484 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1.97478 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        2.99271 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.67377 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.72169 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        3.75979 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        3.79348 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        3.82718 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        4.30507 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        4.47023 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        4.76998 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 4.30507 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        4.45827 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00190155
    Ortholog (46)
    Paralog: WBGene00122925 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00136408 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00128897 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00219202 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127321 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130752 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00131351 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00181081 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207557 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans sma-2. In C. elegans, sma-2 is involved in several processes, including male anatomical structure morphogenesis; positive regulation of cell growth; and regulation of anatomical structure morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA04358
    Corresponding_transcript: CJA04358.1
    Other_sequence (71)
  Experimental_info: Expr_pattern: Expr1070734
      Expr1082928
    Microarray_results: GPL14145_CJA04358_499-558_0.930_2_B
      GPL14145_CJA04358_504-563_0.931_1_A
      GPL14145_CJA04358_508-567_0.927_3_C
      GPL14145_CJA05394_172-231_0.899_2_B
      GPL14145_CJA05394_178-237_0.898_3_C
      GPL14145_CJA05394_62-121_0.909_1_A
  Method: Gene