WormBase Tree Display for Gene: WBGene00203648
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| WBGene00203648 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-sma-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA30782 | ||||||||
| Molecular_name | PPA30782 | ||||||||
| PPA30782.1 | |||||||||
| PP67786 | |||||||||
| Other_name | UMM-S50-28.30 | Person_evidence | WBPerson606 | ||||||
| Public_name | Ppa-sma-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 04 Nov 2010 10:28:59 | WBPerson4055 | Event | Imported | from Assembly 2 | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-sma-3 | ||||
| 3 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-sma-3 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-sma-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sma | ||||||||
| RNASeq_FPKM | WBls:0000032 | 2.92967 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 17.301 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 2.92967 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 6.74356 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00231275 | ||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00104801 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00107411 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00110942 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00111571 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278260 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278341 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be involved in regulation of DNA-templated transcription and transforming growth factor beta receptor signaling pathway. Is an ortholog of C. elegans sma-3. In C. elegans, sma-3 is involved in several processes, including defense response to other organism; male anatomical structure morphogenesis; and regulation of developmental process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA30782 | |||||||
| Corresponding_transcript | PPA30782.1 | ||||||||
| Other_sequence (24) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_62062 | |||||||
| GPL14372_Probes_62064 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-sma-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-sma-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
