WormBase Tree Display for Gene: WBGene00198814
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| WBGene00198814 | SMap | S_parent | Sequence | F31C3 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | F31C3.15 | ||||||
| Molecular_name | F31C3.15 | |||||||
| Other_name | CELE_F31C3.15 | Accession_evidence | NDB | BX284601 | ||||
| Public_name | F31C3.15 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_F31C3.15 | ||||
| NCBI | gene | 13183154 | ||||||
| RefSeq | protein | NR_050769.1 | ||||||
| RNAcentral | URSid | URS00003E727B | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 06 Oct 2010 16:59:21 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001263 | ||||||
| Allele | WBVar02148058 | |||||||
| WBVar02124537 | ||||||||
| WBVar02123655 | ||||||||
| WBVar00255904 | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Structured_description | Automated_description | Is affected by several genes including vit-2; tdp-1; and mrps-5 based on RNA-seq studies. Is affected by multi-walled carbon nanotube based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_transcript | F31C3.15 | ||||||
| Other_sequence (204) | ||||||||
| Experimental_info | Expression_cluster | WBPaper00045521:Gender_Neutral | ||||||
| WBPaper00046012:tdp-1(ok803)_downregulated | ||||||||
| WBPaper00049377:MWCNT_upregulated | ||||||||
| WBPaper00051305:vit-2(ac3)_downregulated | ||||||||
| WBPaper00055013:hmg-4(RNAi)_upregulated | ||||||||
| WBPaper00055049:S.gordonii_downregulated | ||||||||
| WBPaper00058725:sftb-1(cer39)_upregulated | ||||||||
| WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA | ||||||||
| WBPaper00065975:P-body_vs_oocyte_depleted | ||||||||
| WBPaper00065975:P-body_vs_WholeAnimal_depleted | ||||||||
| Map_info | Positive | Positive_clone | F31C3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | I | 29.9681 | ||||||
| Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
| Accession_evidence | modENCODE | ncRNA_frag724 | ||||||
| Curator_confirmed | WBPerson4025 | |||||||
| Method | Gene |
