WormBase Tree Display for Gene: WBGene00195165
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| WBGene00195165 | SMap | S_parent | Sequence | F57G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F57G4.11 | |||||||
| Molecular_name | F57G4.11 | ||||||||
| F57G4.11.1 | |||||||||
| CE45148 | |||||||||
| Other_name | CELE_F57G4.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F57G4.11 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00195165 | |||||
| NDB | locus_tag | CELE_F57G4.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00195165|UniProtKB=D9N150 | |||||||
| family | PTHR23014 | ||||||||
| NCBI | gene | 13217928 | |||||||
| RefSeq | protein | NM_001269822.3 | |||||||
| TREEFAM | TREEFAM_ID | TF352372 | |||||||
| TrEMBL | UniProtAcc | D9N150 | |||||||
| UniProt_GCRP | UniProtAcc | D9N150 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 03 Jun 2010 14:57:52 | WBPerson4025 | Event | Split_from | WBGene00010206 | ||
| Split_from | WBGene00010206 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (96) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | CSP26.g762 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | |||||
| Cnig_chr_V.g20668 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00883.g16442 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17510 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (176) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-16; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fourteen chemicals including metformin; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57G4.11 | |||||||
| Corresponding_transcript | F57G4.11.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00048890 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015903 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1152637 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (143) | |||||||||
| SAGE_tag | SAGE:aatcttctagtatcgct | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:tgaatttata | Strand | Antisense | |||||||
| SAGE:tttccattgt | Strand | Antisense | |||||||
| SAGE:aatcttctag | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction | WBInteraction000575383 | ||||||||
| Map_info | Positive | Positive_clone | F57G4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 12.9348 | |||||||
| Reference | WBPaper00063926 | ||||||||
| Method | Gene |
