WormBase Tree Display for Gene: WBGene00195045
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| WBGene00195045 | SMap | S_parent | Sequence | W05F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | W05F2.8 | |||||||
| Molecular_name | W05F2.8a | ||||||||
| W05F2.8a.1 | |||||||||
| CE44725 | |||||||||
| W05F2.8b | |||||||||
| CE50223 | |||||||||
| W05F2.8b.1 | |||||||||
| Other_name | CELE_W05F2.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | W05F2.8 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00195045 | |||||
| NDB | locus_tag | CELE_W05F2.8 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00195045|UniProtKB=F0IWT6 | |||||||
| family | PTHR10503 | ||||||||
| NCBI | gene | 13179739 | |||||||
| RefSeq | protein | NM_001313516.1 | |||||||
| NM_001262424.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AQS0 | |||||||
| F0IWT6 | |||||||||
| UniProt_GCRP | UniProtAcc | F0IWT6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 10 Mar 2010 09:27:23 | WBPerson1867 | Event | Split_from | WBGene00021039 | ||
| Split_from | WBGene00021039 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar00625803 | ||||||||
| WBVar00625804 | |||||||||
| WBVar00625805 | |||||||||
| WBVar01499416 | |||||||||
| WBVar01499786 | |||||||||
| WBVar01499985 | |||||||||
| WBVar02114292 | |||||||||
| WBVar01431036 | |||||||||
| WBVar01431037 | |||||||||
| WBVar01283805 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00141207 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||
| WBGene00210653 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| chrI_pilon.g497 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00001996 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010363 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00017990 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017993 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021913 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00194861 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in PLML; PLMR; neurons; and pm8 based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by metformin and Doxycycline based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05F2.8a | |||||||
| W05F2.8b | |||||||||
| Corresponding_transcript | W05F2.8a.1 | ||||||||
| W05F2.8b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00063462 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049280 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049631 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103060 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006953 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1158374 | ||||||||
| Expr2006804 | |||||||||
| Expr2025029 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (42) | |||||||||
| Map_info | Positive | Positive_clone | W05F2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -3.79402 | |||||||
| Method | Gene |
