WormBase Tree Display for Gene: WBGene00194986
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| WBGene00194986 | SMap | S_parent | Sequence | T27F7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pigb-1 | |||||||
| Sequence_name | T27F7.4 | ||||||||
| Molecular_name | T27F7.4 | ||||||||
| T27F7.4.1 | |||||||||
| CE30458 | |||||||||
| Other_name | CELE_T27F7.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | pigb-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 19 Feb 2010 11:13:47 | WBPerson1849 | Event | Split_from | WBGene00020868 | ||
| 2 | 11 Dec 2018 16:50:34 | WBPerson1983 | Name_change | CGC_name | pigb-1 | ||||
| Split_from | WBGene00020868 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pigb | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00051415 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00014302 | ||||||||
| 00014303 | |||||||||
| 00014304 | |||||||||
| 00014305 | |||||||||
| 00014306 | |||||||||
| 00014307 | |||||||||
| 00014308 | |||||||||
| 00014309 | |||||||||
| 00230921 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00007556 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022629 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable alpha-1,2-mannosyltransferase activity. Predicted to be located in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 80. Is an ortholog of human PIGB (phosphatidylinositol glycan anchor biosynthesis class B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112216 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8959) | ||||
| Molecular_info | Corresponding_CDS | T27F7.4 | |||||||
| Corresponding_transcript | T27F7.4.1 | ||||||||
| Other_sequence (19) | |||||||||
| Experimental_info | RNAi_result (50) | ||||||||
| Expr_pattern | Expr1040473 | ||||||||
| Expr1157896 | |||||||||
| Expr2006586 | |||||||||
| Expr2024802 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (54) | |||||||||
| Map_info | Map | II | Position | -2.60434 | |||||
| Positive | Positive_clone | T27F7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
