WormBase Tree Display for Gene: WBGene00194852
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| WBGene00194852 | SMap | S_parent | Sequence | T28A8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T28A8.8 | |||||||
| Molecular_name | T28A8.8a | ||||||||
| T28A8.8a.1 | |||||||||
| CE45411 | |||||||||
| T28A8.8b | |||||||||
| Other_name | CELE_T28A8.8 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | T28A8.8 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00194852 | |||||
| NDB | locus_tag | CELE_T28A8.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00194852|UniProtKB=E2JL07 | |||||||
| family | PTHR23362 | ||||||||
| NCBI | gene | 13191798 | |||||||
| RefSeq | protein | NM_001268279.2 | |||||||
| NR_052832.1 | |||||||||
| TrEMBL | UniProtAcc | E2JL07 | |||||||
| UniProt_GCRP | UniProtAcc | E2JL07 | |||||||
| RNAcentral | URSid | URS0000146BDC | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 04 Nov 2009 15:33:56 | WBPerson1983 | Event | Split_from | WBGene00012111 | ||
| Split_from | WBGene00012111 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01498619 | ||||||||
| WBVar01499774 | |||||||||
| WBVar01498679 | |||||||||
| WBVar01499629 | |||||||||
| WBVar00876006 | |||||||||
| WBVar00876007 | |||||||||
| WBVar00876008 | |||||||||
| WBVar01794434 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIII_pilon.g9374 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including rotenone; manganese chloride; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SPK domain and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A8.8a | |||||||
| Corresponding_CDS_history | T28A8.8:wp219 | ||||||||
| Corresponding_transcript | T28A8.8b | ||||||||
| T28A8.8a.1 | |||||||||
| Other_sequence | JI476460.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00082455 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006240 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054374 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00082650 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1157924 | ||||||||
| Expr2006595 | |||||||||
| Expr2024812 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (82) | |||||||||
| Map_info | Positive | Positive_clone | T28A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 21.2481 | |||||||
| Method | Gene |
