WormBase Tree Display for Gene: WBGene00176985

WBGene00176985 SMap: S_parent: Sequence: Cjap.Contig17162
  Identity: Version: 3
    Name: CGC_name: Cjp-unc-38 From_analysis: Inferred_from_orthology
      Sequence_name: CJA21413
      Molecular_name: CJA21413
        CJA21413.1
        JA20216
      Public_name: Cjp-unc-38
    Species: Caenorhabditis japonica
    History: Version_change: 1 22 Jan 2009 15:16:35 WBPerson4055 Event: Imported: from WASHU
        2 27 Jan 2009 12:59:26 WBPerson4055 Name_change: CGC_name: Cjp-unc-38
        3 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 16.83 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 10.5863 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 6.10908 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        6.28075 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        6.45241 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 0.651312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.00385 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.13032 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.30983 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.43842 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.46811 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.6264 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.70868 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.74417 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        2.33277 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 1.70868 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        3.96039 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation (8)
    Ortholog: WBGene00006774 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039464 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00072191 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152462 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162467 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00223751 Brugia malayi From_analysis: WormBase-Compara
      WBGene00228955 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10464 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g10467 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12243 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g12244 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15016 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g9547 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13080 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10706 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g143 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15409 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4843 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g25433 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19222 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00197.g6777 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00197.g6778 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-38 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9762 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02628.g27301 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10350 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000225 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10735 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13629 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g22402 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g5307 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10079400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237784 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00238596 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00274031 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00260575 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302451 Trichuris muris From_analysis: WormBase-Compara
    Paralog (118)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-38. In C. elegans, unc-38 is involved in several processes, including calcium ion import across plasma membrane; neuromuscular synaptic transmission; and regulation of multicellular organismal process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA21413
    Corresponding_transcript: CJA21413.1
    Other_sequence (50)
  Experimental_info: Expr_pattern: Expr1091905
    Microarray_results: GPL14145_CJA21413_1372-1431_0.801_72_B
      GPL14145_CJA21413_1495-1554_0.962_1_A
      GPL14145_CJA21413_963-1022_0.893_8_C
  Method: Gene