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WormBase Tree Display for Gene: WBGene00072191

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Name Class

WBGene00072191SMapS_parentSequenceCrem_Contig300
IdentityVersion3
NameCGC_nameCre-unc-38From_analysisInferred_from_orthology
Sequence_nameCRE13116
Molecular_nameCRE13116
CRE13116.1
RP40385
Other_namecr01.sctg321.wum.1
Public_nameCre-unc-38
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
229 Nov 2007 17:00:41WBPerson2970Name_changeCGC_nameCre-unc-38
303 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE13116
Other_namecr01.sctg321.wum.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.874925From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.904854From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.934782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.5467From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.11805From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.19002From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.037From_analysisRNASeq.remanei.WBls:0000027.control_median
5.88399From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
5.93469From_analysisRNASeq.remanei.WBls:0000027.control_mean
WBls:00000383.81279From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
4.81157From_analysisRNASeq.remanei.WBls:0000038.control_mean
4.89167From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
5.73026From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.883412From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.13696From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.24733From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
2.38173From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.40513From_analysisRNASeq.remanei.WBls:0000041.control_median
3.56293From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
3.66056From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
3.79919From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:00000630.772062From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
1.03649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
1.10938From_analysisRNASeq.remanei.WBls:0000063.control_median
1.18226From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
1.52234From_analysisRNASeq.remanei.WBls:0000063.control_mean
1.57275From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
2.38074From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
3.33233From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
4.94676From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
WBls:00001011.8454From_analysisRNASeq.remanei.total_over_all_stages.control_median
2.67296From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00166029
00166030
00166031
00166032
00166033
00166034
00166035
00166036
Ortholog (37)
Paralog (121)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-38. In C. elegans, unc-38 is involved in several processes, including calcium ion import across plasma membrane; neuromuscular synaptic transmission; and regulation of multicellular organismal process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE13116
Corresponding_transcriptCRE13116.1
Other_sequence (45)
Experimental_infoExpr_patternExpr1114350
Microarray_resultsGPL14146_CRE13116_1321-1380_0.886_25_B
GPL14146_CRE13116_1438-1497_0.883_27_A
GPL14146_CRE13116_892-951_0.514_204_C
MethodGene