WormBase Tree Display for Gene: WBGene00159574

WBGene00159574 SMap: S_parent: Sequence: Cbre_Contig147
  Identity: Version: 1
    Name: Sequence_name: CBN20849
      Molecular_name: CBN20849
        CBN20849.1
        CN02404
      Public_name: CBN20849
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        45.0014 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        90.0027 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 119.377 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        132.341 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        369.204 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        398.543 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        492.983 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 40.3081 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        40.5969 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        40.8857 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 34.54 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        37.2996 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00153484 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00148382 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00158132 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Autophagy protein Atg8 ubiquitin like; Autophagy protein Atg8 ubiquitin-like; and Ubiquitin-like domain superfamily. Is an ortholog of C. elegans lgg-2. In C. elegans, lgg-2 is involved in cellular response to toxic substance; defense response to other organism; and positive regulation of autophagosome maturation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN20849
    Corresponding_transcript: CBN20849.1
    Other_sequence (35)
  Experimental_info: Microarray_results: GPL14142_CBN14759_325-384_0.839_7_A
  Method: Gene